Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00548 ATGCACTTCATTGATTCTTTTGAAATTGATCTTATATATATCGATGAAGTAGATTGTTTAATTTGTGTTGGTCGTGTGAATAACTTGACCATGGAAATTCCTCTTTGGGAGATTGTGAATGTGGACCAAACACTCGTCCAAAACAAGATATGGGAGATTATCAACAACACAATCGCTCAAAAAATTCTTCTTGTTTTGATTTGTGTTTCTTTGTTTTGGAAGATGATTCGATACATGTGTGGTCTTCTCCATCAAGAGAAGGAACCCGTTACAGTATTGGTCACGGGTGCTGCAGGGCAAATAGGGTATGCACTGGTAGCAATGATAGCAAGAGGGGCAATGCTAGGGCCAAATCAGCCGGTGATTCTTCACATGCTTGACATTGAGCCAGCAGCGGAGGCATTGAAAGGAGTGAAGATGGAGCTGATGGACGCGGCGCTGCCGCTTCTAAGAGGGATTGTGGCTTCCACCGACGTGGCAGAGGCATGCAAGGGGGTCAACATTGCGGTCATGCTTGGTGGTTTCCCGAGAAAAGAAGGGATGGAAAGAAAAGACGTCATGTCCAAGAATGTGTCCATATACAAGGCGCAGGCGTCCGCGCTTGAGAAGCACGCCGCCGCCGATTGCAAGGTGCTGGTGGTGGCCAATCCGGCCAACACCAACGCTCTCATACTCAAGGAGTTTGCTCCGTCCATTCCTGACAAGAACATCACTTGCCTTACTAGGCTCGACCATAATAGAGCCCTCGCTCAGATCTCTGAGAGGACGAAGGTTCATATCACGGATGTCAAGAATGTTATCATTTGGGGCAACCATTCCTCCACCCAGTATCCGGATGTGAACCATGCCACCGTTCAGGAGAAGCCTGTGAGGGAAGTTGTCGGCGACGATGAATGGCTCAACAACGACTTCATTGCCACCGTTCAGCAGCGAGGGGCTGCCATCATCAAAGCTAGGAAGCTCTCTAGTGCACTCTCCGCAGCAAGCTCTGCTTGTGATCATATACGTGACTGGGTTCTTGGTACTCCCAAGGGATCCTGGGTTTCAATGGGAGTATATTCCGATGGCTCATACGATATTCAACCTGGTCTAATTTACTCTTTTCCGGTTACATGTGAGAAAGGAGAATGGAGCATCGTACAGGGGCTAGAGATCGATGCATTCTCAAGGGAAAAGATGGATAAAACTGCCCAAGAGCTCATTGAAGAGAAAGAATTGGCTAAGTCATGTCTCCACTGA 1239 0.4778 MHFIDSFEIDLIYIDEVDCLICVGRVNNLTMEIPLWEIVNVDQTLVQNKIWEIINNTIAQKILLVLICVSLFWKMIRYMCGLLHQEKEPVTVLVTGAAGQIGYALVAMIARGAMLGPNQPVILHMLDIEPAAEALKGVKMELMDAALPLLRGIVASTDVAEACKGVNIAVMLGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAADCKVLVVANPANTNALILKEFAPSIPDKNITCLTRLDHNRALAQISERTKVHITDVKNVIIWGNHSSTQYPDVNHATVQEKPVREVVGDDEWLNNDFIATVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGSWVSMGVYSDGSYDIQPGLIYSFPVTCEKGEWSIVQGLEIDAFSREKMDKTAQELIEEKELAKSCLH 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00548 412 Pfam lactate/malate dehydrogenase, NAD binding domain 91 237 IPR001236 GO:0016491
Adu02g00548 412 TIGRFAM MalateDH-SF1: malate dehydrogenase 87 406 IPR010945 GO:0006108|GO:0016615
Adu02g00548 412 ProSitePatterns Malate dehydrogenase active site signature. 240 252 IPR001252 GO:0006108|GO:0016615
Adu02g00548 412 TIGRFAM MDH_euk_cyt: malate dehydrogenase, NAD-dependent 92 408 IPR011274 GO:0006108|GO:0030060
Adu02g00548 412 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 239 IPR036291 -
Adu02g00548 412 PANTHER MALATE DEHYDROGENASE 69 411 IPR010945 GO:0006108|GO:0016615
Adu02g00548 412 PANTHER MALATE DEHYDROGENASE 3, CYTOPLASMIC 69 411 - -
Adu02g00548 412 Gene3D - 240 412 IPR015955 GO:0003824|GO:0016616
Adu02g00548 412 SUPERFAMILY LDH C-terminal domain-like 241 411 IPR015955 GO:0003824|GO:0016616
Adu02g00548 412 Gene3D - 87 239 - -
Adu02g00548 412 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 241 408 IPR022383 GO:0016616
Adu02g00548 412 Hamap Malate dehydrogenase [mdh]. 86 411 IPR010945 GO:0006108|GO:0016615
Adu02g00548 412 CDD MDH_cytoplasmic_cytosolic 88 407 IPR011274 GO:0006108|GO:0030060
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00548 Adu-Chr2 7108991 7111079 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00548 K00025 - gmx:100783188 597.816