Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00547 ATGCAACGCGCAAGATCGCTCCTAACAAGGTTTAATCCAATCGCATACAGATACAGATACAGATTCCAAAGCCGAACCCTGTGTTCTTCGAACGAGGAAGTTGTGGTTGTTGAAGGAAACGGTTACTCGAGAATGGCAATTCTCAACAGACCCACTGCTCTCAACGCCCTCAACACCTCCATGGTATTATTATTATTTGATAATTTCTGTTTAATTAATCATTATTTGAGGTTTGTCTCGCTGACTGACTCAACTCAGGTGGCTACCCTCAGCAAACTTTACCGATCTTGGGAAGATAACCCCGACGTTGGCTTTGTCACCATCAAGGGCAGTGGTCGGGCATTTGCAGCTGGCGGTGATATTGTCGCCATTTACCATTTCATCAACAGAGCCAACATGGAAGCCTGCAAGGAATTCTTCCGAACAATATATCGTTTTATTTACGTCATAGGTACATATATGAAGCCACATATCGCTCTTCTGAATGGCATTACCATGGGTGGTGGAGCTGGAATTTCAATCCCTGGCACTTTTCGAGTTGCAACCGACAAAACTATTTTTGCTACCCCTGAAGTTCTTATTGGATTTCACCCTGATGCTGGAGCATCTTTCTACCTTTCACATTTACCTGGTCACTTAGGTGAATACTTGGCCCTAACAGGGGAAAAGCTCAATGGAGTAGAGATGGTTACTTGTGGACTTGCTACACACTACTCACTAAGTGCAAGGCTCCCGTTAATTGAAGAACAGCTGGGGAAATTAGTTACTGATGATCCTTCTGTAATTGAAACCACTTTAGAACAGTATGGTGACCTTGTACAACCAGATAGCAGTAGTGTACTTCAAAGGATTGAAATTGTAGATAAATGCTTTTGCCATGACACAGTGGAAGAGATTGTTGATTCTTTGGTGAGCTTTACATCTTCCGTTAAATTTAAGAAAGTTTCCTTGAGATCAATACGAGAGGGTAGATTTCAGACTCTTGACCAGTGCTTGTCGCGTGAGTACCATATGACTTTACAAGCAACATCTAAGCAGATTTCTGGTGACTTTTGTGAGGGGATAAGGGCTCGTGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACATTGGAAAAGGTGTCTCAAGACATGGTGGATCAGTACTTCTCACCTCTAAGTGAATTTGAACCTGGTCTAGGGCTCCCCACAAAAGTTAGAGAAGCATTTTTGTAG 1221 0.4308 MQRARSLLTRFNPIAYRYRYRFQSRTLCSSNEEVVVVEGNGYSRMAILNRPTALNALNTSMVLLLFDNFCLINHYLRFVSLTDSTQVATLSKLYRSWEDNPDVGFVTIKGSGRAFAAGGDIVAIYHFINRANMEACKEFFRTIYRFIYVIGTYMKPHIALLNGITMGGGAGISIPGTFRVATDKTIFATPEVLIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLSARLPLIEEQLGKLVTDDPSVIETTLEQYGDLVQPDSSSVLQRIEIVDKCFCHDTVEEIVDSLVSFTSSVKFKKVSLRSIREGRFQTLDQCLSREYHMTLQATSKQISGDFCEGIRARVVDKDFAPKWDPPTLEKVSQDMVDQYFSPLSEFEPGLGLPTKVREAFL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00547 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 26 405 IPR032259 GO:0003860
Adu02g00547 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 26 405 - -
Adu02g00547 406 CDD crotonase-like 48 237 - -
Adu02g00547 406 Gene3D - 29 395 - -
Adu02g00547 406 SUPERFAMILY ClpP/crotonase 33 371 IPR029045 -
Adu02g00547 406 Pfam Enoyl-CoA hydratase/isomerase 87 385 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00547 Adu-Chr2 7098250 7102054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00547 1 406 Acyl Lipid Metabolism Gene Families AT4G31810 52.995 3.25e-160 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00547 K05605 - gmx:100801676 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00547 02 7098250 7102054 Adu02g00547 02 7098250 7102054 ECH