Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00485 ATGGCAGAAAAGTCATGTATCAAGCGCCTTCAGAAGGAATACAGAGCTCTTTGTAAAGAGCCAGTGTCCCATGTTGTAGCTCGCCCATCACCAAATGATATTCTTGAATGGCATTATGTGTTGGAGGGAAGCGAAGGAACACCTTTTGCAGGTGGATATTACTACGGAAAAATCAAGTTTCCTCCAGAATATCCATATAAGCCTCCTGGAATCAGCATGACTACACCTAATGGACGGTTCATGACGCAGAAAAAGATTTGTTTGTCTATGAGTGATTTTCATCCTGAAAGTTGGAATCCTATGTGGTCTGTTTCAAGCATACTCACAGGGCTTCTTTCATTCATGATGGACAACAGCCCAACCACCGGCAGTGTAAACACCACCACCGCCGAGAAGCAGCGTTTAGCAAAATCTTCCCTTTCTTTCAATTGCAAGAACGCAACATTCAGGAAAATGTTCCCTGAGTATGTGGAGAAGTACAACCAGGAGCAGCAGCTTTCTGAACAAGTTCCTCCCGAGCAGGCATCATCAGAGGCAGCGCCTAATGACACAAGTCCAAAGGCTCTTTTGGAGAAGAATTTGGATTCTACGGAAGAAGGAACGAAAAGAGTAGAACAGTTGAAGGTTGTAAAGAAAAACGGAAAGCAACCATTCCCAGCATGGATGATGTTATTACTATTCTCCATCTTTGGGGTTGTAATGGCATTACCATTGCTTCAGCTCTGA 726 0.438 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTTAEKQRLAKSSLSFNCKNATFRKMFPEYVEKYNQEQQLSEQVPPEQASSEAAPNDTSPKALLEKNLDSTEEGTKRVEQLKVVKKNGKQPFPAWMMLLLFSIFGVVMALPLLQL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00485 241 MobiDBLite consensus disorder prediction 163 183 - -
Adu02g00485 241 CDD UBCc 7 157 IPR000608 -
Adu02g00485 241 PANTHER BNAA06G11590D PROTEIN 3 241 - -
Adu02g00485 241 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Adu02g00485 241 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Adu02g00485 241 SMART ubc_7 8 162 - -
Adu02g00485 241 Pfam Ubiquitin-conjugating enzyme 9 132 IPR000608 -
Adu02g00485 241 MobiDBLite consensus disorder prediction 163 201 - -
Adu02g00485 241 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 241 - -
Adu02g00485 241 SUPERFAMILY UBC-like 5 157 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00485 Adu-Chr2 6086322 6088643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00485 1 241 Miscellaneous Gene Families AT1G17280 78.423 1.62e-137 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00485 K04554 - gmx:100778181 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00485 02 6086322 6088643 Adu02g00485 02 6086322 6088643 ECH