Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00460 ATGGTAGTAGCTGCAGGTTCTAGTGTTGCTAAGCTCAACTTGAGAAAAGGGAAGGGTTCTTCTTATAATGTTATGAGCGGTGGTGATAACAGTGATGGAGATCTTTCCATTGTTAGTAATAACAGTGACAGTGAGTGTTGTTCATCATCAATGGTGGAGGTGGAAAGGGGTCCTTCATGTGTTTCATTCACCACTTTCAATATCTTGGCTCCTATTTACAAAAGGATTGATCCAAAGAACCAAAGCCTCAGGGAAAGTGAGTTCAGGTACTCCTGGTTGTCCAGGAATGAATGTATTCTGAATTCCTTGCTTGCTGAATCATCTTCCATAATGTGCCTTCAGGAATTTTGGGTTGGAAATGAAGAACTTGTTCATATGTATGAGGAGAAACTAGGGGATGCTGGTTACCATCTCTTCAAGCTTGCTCGAACCAACAACCGCGGAGATGGTCTTCTTACTGCTATACACAAAAAATATTTACATGTTGTGAATTATCGGGAGTTGTTTTTAAACGATTTCGGTGATCGTGTTGCTCAGTTGTTACACGTTCAGTCTATTGCCCCTGTTTCGCAAAACCAAATGGGAAGTCTTCACCAAGAGTTTCTTATTGTGAACACACACCTGTTATTTCCTCACAATTCAAGTCTATGTATAGTGAGATTGCATCAGGTTCACCAAATTTTGGAGCAAGTGGAATTGTTTCAAAAAGAAAACAAGCTGAAACCGATGCCTATTATACTCTGCGGTGACTGGAATGGAAGTAAGAAAGGGCATGTATACAAGTTTCTTAGGTCACAAGGGTTTGTTTCATCATATGACAGTTATGCAGATTCCCACAAGCAGTGGGTTAGTCACCGAAATCATAGAGGAAATATCTGCGGTGTCGACTTCATTTGGCTTTGCAATCCGAACCAACCACGGAAACCTTTGAAGACAAGTTGGGCCGAAGCTGTTTTTAGCATACTCAAGTACCAGCTACGAAAAGCTTCGCTGTCTGAAGACGGTGCATTTACATTTCTGAAGGGCGACAATTGTGCCGATGCTGTGACATATCTTAGTTTCCATGAAGCATTGCGGCAGGTAAAATTAGTTGATGTGCCTAATGGATTATGCATTCAGCAGTTCCAAGATCTATGGAATCAAGCAGATGTTGATGGAAATGGGGTCATCGACTTCGAGGAATTCAAGCAAAAGATTTGGAACTCTACATGTCCAGAGCCTGTATTGGAAAGCTTCAATGGTTGCATGGAGGATGTGAATGCGACGAATGAGCACGAAACCATCGGCTTTAAGGTGAAGAAGGCGATGTTGTTCCCTCGAGAAGTCGAGAGAGGACATTGGCCAGAAGAGTATTCTCTTTCAGATCATGCTAGGCTCACTGCTGTGTTTTCACCAGCAAAGATGAGATGTCATGGATCACAAAACTATAGCTAG 1434 0.4212 MVVAAGSSVAKLNLRKGKGSSYNVMSGGDNSDGDLSIVSNNSDSECCSSSMVEVERGPSCVSFTTFNILAPIYKRIDPKNQSLRESEFRYSWLSRNECILNSLLAESSSIMCLQEFWVGNEELVHMYEEKLGDAGYHLFKLARTNNRGDGLLTAIHKKYLHVVNYRELFLNDFGDRVAQLLHVQSIAPVSQNQMGSLHQEFLIVNTHLLFPHNSSLCIVRLHQVHQILEQVELFQKENKLKPMPIILCGDWNGSKKGHVYKFLRSQGFVSSYDSYADSHKQWVSHRNHRGNICGVDFIWLCNPNQPRKPLKTSWAEAVFSILKYQLRKASLSEDGAFTFLKGDNCADAVTYLSFHEALRQVKLVDVPNGLCIQQFQDLWNQADVDGNGVIDFEEFKQKIWNSTCPEPVLESFNGCMEDVNATNEHETIGFKVKKAMLFPREVERGHWPEEYSLSDHARLTAVFSPAKMRCHGSQNYS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00460 477 SUPERFAMILY EF-hand 351 401 IPR011992 -
Adu02g00460 477 Pfam Endonuclease/Exonuclease/phosphatase family 105 269 IPR005135 GO:0003824
Adu02g00460 477 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 33 471 - -
Adu02g00460 477 Gene3D - 306 430 - -
Adu02g00460 477 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Adu02g00460 477 SUPERFAMILY DNase I-like 44 275 IPR036691 -
Adu02g00460 477 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Adu02g00460 477 Gene3D Endonuclease/exonuclease/phosphatase 41 471 IPR036691 -
Adu02g00460 477 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 33 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00460 Adu-Chr2 5742397 5746902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00460 126 470 EF-hand Containing Proteins AT1G02270 62.464 1.25e-157 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00460 - - gmx:100777138 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00460 02 5742397 5746902 Adu02g00460 02 5742397 5746902 ECH