Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00354 ATGACTTCGAAAGATGTAAAAAGCGGTGAATCTGCAGTCACAAAGATCGTTACTCTGGCCGAGGAAGCTAAGCTCGCTAGTCGTGAAGGCGTCGTCACCGCCGCCGCCGCTCCTTCCTACGCCTTCACCACCATCTGCAAGTCCCTTATCGCCGGTGGAGTCGCCGGAGGAGTATCACGAACAGCAGTTGCCCCACTAGAACGGTTGAAGATTTTGCTACAGGTCCAGAATCCTCATAACATTAAATACAATGGAACAGTCCAAGGCCTGAAATATATATGGAGAACTGAAGGTTTTCGTGGACTGTTCAAAGGGAATGGTACTAATTGTGCTCGGATTGTCCCTAACTCTGCAGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAGGGTATACTGTATATGTATAGGCAGCAAACTGGAAATGAGGATGCTCAGCTGACTCCTGTTTTACGACTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCAACTTATCCAATGGATATGGTTCGAGGCAGGATAACTGTACAGACTGAGAAATCCCCTTATCAGTATAGAGGAATGTTCCATGCTCTGTCTACCGTACTTAGGGAAGAAGGTCCACGTGCTTTATACAAGGGTTGGCTACCTTCAGTAATTGGAGTTATTCCTTATGTGGGTCTCAACTTTGCTGTCTACGAGTCTTTAAAAGATTGGTTAATCAAATCCAAACCGTTTGGTCTAGCTCAAGATTCTGAGTTGAGTGTGACAACACGTCTGGCTTGTGGTGCTGTTGCTGGAACTTTTGGACAAACTGTTGCTTATCCTCTCGACGTCATTCGTCGAAGAATGCAGATGGTGGGCTGGAACCATGCTGCTTCTGTTGTAGCTGGGGATGGAAGAGGCAAGGTCCTGCTCGAATACACTGGAATGATAGATGCATTTAGGAAAACTGTTCGGTACGAGGGATTTGGTGCATTATACAAGGGTCTGGTGCCAAATTCTGTAAAGGTGGTGCCGTCCATAGCAATCGCATTTGTAACGTACGAGGCAAGGGGATGCAGAGATGATAGATCATAG 1065 0.4648 MTSKDVKSGESAVTKIVTLAEEAKLASREGVVTAAAAPSYAFTTICKSLIAGGVAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTVQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYMYRQQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKPFGLAQDSELSVTTRLACGAVAGTFGQTVAYPLDVIRRRMQMVGWNHAASVVAGDGRGKVLLEYTGMIDAFRKTVRYEGFGALYKGLVPNSVKVVPSIAIAFVTYEARGCRDDRS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00354 354 PANTHER SOLUTE CARRIER FAMILY 25 1 346 - -
Adu02g00354 354 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Adu02g00354 354 PRINTS Mitochondrial carrier protein signature 105 125 IPR002067 GO:0055085
Adu02g00354 354 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085
Adu02g00354 354 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Adu02g00354 354 PRINTS Mitochondrial carrier protein signature 258 280 IPR002067 GO:0055085
Adu02g00354 354 PRINTS Mitochondrial carrier protein signature 161 179 IPR002067 GO:0055085
Adu02g00354 354 Gene3D Mitochondrial carrier domain 41 348 IPR023395 -
Adu02g00354 354 PANTHER BNAA09G39370D PROTEIN 1 346 - -
Adu02g00354 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 130 IPR018108 -
Adu02g00354 354 Pfam Mitochondrial carrier protein 146 238 IPR018108 -
Adu02g00354 354 Pfam Mitochondrial carrier protein 45 130 IPR018108 -
Adu02g00354 354 Pfam Mitochondrial carrier protein 248 345 IPR018108 -
Adu02g00354 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 234 IPR018108 -
Adu02g00354 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 350 IPR018108 -
Adu02g00354 354 SUPERFAMILY Mitochondrial carrier 45 345 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00354 Adu-Chr2 3774076 3777592 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00354 49 346 EF-hand Containing Proteins AT5G51050 40.468 3.76e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00354 K14684 - gmx:100777048 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00354 02 3774076 3777592 Adu02g00354 02 3774076 3777592 ECH
Adu06g00215 06 2724543 2727750 Adu02g00354 02 3774076 3777592 PCT