Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00348 ATGACTGCAAATGGTGGAACAGGAACTGAGGAACAACAACAACAACAACACAAGAGGAAGAAGGTGTTTGATTCTTTGCTCAAACCAAGTGTTCAAAAGTCACCAAGATTGTGCACAACTATTAGGGAAGGTTGGCCAGAAATCTTGCAAAATGAGTGTGTTATTGGTAATGATGATAACAACTTGAGTAGATGTGTTGCTTCGTTAGCTGGATCTGGACCTCCTAGTACTAGTTATTGTTCCATGACAGATTCTGCTCACATTGATGATGATTTAACTGTTAGAACTCATAATAAGAACCCTAATTTCTACCCTCAGAGGAATCAGTTAGCTATTGAGTCTAGGTATAGTAACTTGAGTAGAGAAATTGTGCAACAAGATGAAGAGCAAATACCATTGAGACTAAGCAAAGGGGTTAAGGGAATTGAATCCGAATTTCGCGGCCTGAAATCATCACTGAGAGTTTCTGCAAATAGAAGCAATGTGGACAAGATCTTTACCTCAAGCAATGGCCTTTTTATTAATGGAACTTCTCAGAATACTTCATCTGCATATAGTGTTTCTCATTTGATTGTGAAGCAAACCGTGAAGGGAAAGGGAGTTATTTGCAAGGACTTCGACGGAAGAATTGGTCCTGCCGGAGTAGTACTTATGAGGCAGGAGGAGGATGAGTCTCATCAATCTGATATGCCGAAACCAGATGCGACAGATAACATGCCTTCCCTGCAAGTAACTGTGAAGTCTGGCACAGGTTCCTCGAATGACGGGATGAACTTGAGAGAGTGGCTTAGGCCACAAGGTCATAAAATCGATAAATCAGGGAGGCTACAAATATTCAAGCAGATTCTGGAATTGGTTGATTTTGCACATTCCCAAGGTGTTGTCATGCTAAACTTAAGACCATCTTGTTTCACTCTATCACCTTCTTCGAGTAAAATCAAGTACATCGGTTCATCTGGCCAACAGGAGTTGCATAAATTATTGACTTGCAATGTGAACAAAAAAATGCCTCTAGAACAGGATGCCGGTGCGAGCCAAATCTTGAGAATGAAGCAGCAAAATTCCTATGAAGAGACAAGATCTCTTCGGCAGCATCATCATTTCACTTCCATTCATGGATGTAGGACTACAATGGCGAATCAAATCGGATCTACCGTAAATGAGTCCACCAAATTAGAAGAGAAGAAATGTATGTCTTTGACGCAATTAGAAGAGAAATGGTATACTAGTCCAGAAGAGCTAGATGGTGGGGTTTGCACATTTTCTTCAAATATTTATAGCCTTGGAATTCTTCTATTTGAGTTGCTGTGCAATATTGAGTCATGGGAGTTGCATTCAGCCGTGATGTCAGATCTATGTCATAGAATCTTACCACCAAGATTTCTATCAGAAAATCCAAAGGAAGCTGGCTTTTGTCTTTGGCATCTTCATCCTGATCCGTCTTCTCGCCCCAATACCAGGATGATTTTAGAGTCTCAGTTTATAGTCGAATCAGAGAAATCAAATTCTGCAGATGATGTTCTGCCGGTTGGAGTATCAGATGATGATGAAGCTGAAACACAGCAATTACTACATTTTCTAGTCTCACTTCAAGAAGAAAAGAAAAAACAGGAATCGAAGTTGGTGGAAGAGCTAAGTTGGTTGGATGAAGACATTAAGTTGGTAGAAAGAAGTAATTCACACGAGACAGATTCGATGTTTCCTTTGAAACAAGTGAACTATCCTGAATTGATAGGAAGCAGTTATCATTTTCCAGAACATGCCATTTCAAGTACTAATGAGGCAAGATTCTTGAGTAACATAAATCAGCTAGAGAGTTCTTATTTTTCAATGAGATGCCAAATGCTACTCAAAGAGGCTTCAACCATCGCAAACTATGATAAAGATGTGATTGAAAGTAGAGACAGATTGCATCATACAGAGAATGTTACTAAGGAGCCCAATAGAATTCAGAGTTCTGCTGGTTCTTTAGGAACCTTCTTTGAAGGTTTATGCAAGTTTGCTCGTTACAGCAAGTTTGAAGAACGCGGCACATTGAGAAACCGAGATCTGCTTAGCTCTGCCAATGTGATATGTGCTTTGAGTTTTGACCGCGACGAGGATTACATCGCAGCAGCCGGAGTTTCAAAGAAGATCAAGGTTTTTGACTTGAGTAGTATTATGAGTGGTTCTGTTGACATCCAGTACCCTGTAGTCGAGATGTCGAATAAATCAAAGCTTAGCTGTGTGTGCTGGAACAGCTATATTAAAAATCATCTGGCTTCTACTGATTATGATGGTGTTGTTCAGATGTGGGATGCAGGCACTGGTCAGCCATTGTCTCAATACATGGAGCACCAAAAGAGAGCTTGGTCTGTTCATTTTTCTCTGTCAGATCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTCAAACTCTGGAATATCGGCGAGAGAAACTCTGTAGGAACCATATGGAACCCTGCCAATGTATGCTGTGTACAGTTCTCCAGTTTCTCAACACACCTTTTGTTCTTTGGTTCAGCTGATTACAAGGTCTACGGCTACGATCTTCGCCACACTCGAGTCCCTTGGTGCACCTTAGGTGGTCATGGAAAAGCTGTTAGCTATGTAAAATCTGTAGATGCTGAAACAGTTGTTTCTGCTTCCACTGACAACTCTTTGAAGCTATGGGACCTGAAGAAAGCAAGTTCTTCTGGTTTGTCATCTGATGCTTGTGCCTTAACCTTCAAAGGTCATAGTAATGAAAAGAATTTTGTAGGTTTATCTGTTTCAGATGGATATATTGCATGCGGTTCGGAAACTAATGAGGTATATTGTTATCACAAGTCACTGCCATTGCCAATCACTTCTCATAAATTCGAATCTATCGATCCGGTTTCTGGTCATTCGACTAGTGATGACAATAATGGACAGTTTGTTTCTAGTGTCTGCTGGAAAAAGAAGTCCAATATGCTTGTTGCCGCCAATTCGATCGGAATTGTGAAACTGCTACAGATGGTTTGA 3009 0.4058 MTANGGTGTEEQQQQQHKRKKVFDSLLKPSVQKSPRLCTTIREGWPEILQNECVIGNDDNNLSRCVASLAGSGPPSTSYCSMTDSAHIDDDLTVRTHNKNPNFYPQRNQLAIESRYSNLSREIVQQDEEQIPLRLSKGVKGIESEFRGLKSSLRVSANRSNVDKIFTSSNGLFINGTSQNTSSAYSVSHLIVKQTVKGKGVICKDFDGRIGPAGVVLMRQEEDESHQSDMPKPDATDNMPSLQVTVKSGTGSSNDGMNLREWLRPQGHKIDKSGRLQIFKQILELVDFAHSQGVVMLNLRPSCFTLSPSSSKIKYIGSSGQQELHKLLTCNVNKKMPLEQDAGASQILRMKQQNSYEETRSLRQHHHFTSIHGCRTTMANQIGSTVNESTKLEEKKCMSLTQLEEKWYTSPEELDGGVCTFSSNIYSLGILLFELLCNIESWELHSAVMSDLCHRILPPRFLSENPKEAGFCLWHLHPDPSSRPNTRMILESQFIVESEKSNSADDVLPVGVSDDDEAETQQLLHFLVSLQEEKKKQESKLVEELSWLDEDIKLVERSNSHETDSMFPLKQVNYPELIGSSYHFPEHAISSTNEARFLSNINQLESSYFSMRCQMLLKEASTIANYDKDVIESRDRLHHTENVTKEPNRIQSSAGSLGTFFEGLCKFARYSKFEERGTLRNRDLLSSANVICALSFDRDEDYIAAAGVSKKIKVFDLSSIMSGSVDIQYPVVEMSNKSKLSCVCWNSYIKNHLASTDYDGVVQMWDAGTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKLWNIGERNSVGTIWNPANVCCVQFSSFSTHLLFFGSADYKVYGYDLRHTRVPWCTLGGHGKAVSYVKSVDAETVVSASTDNSLKLWDLKKASSSGLSSDACALTFKGHSNEKNFVGLSVSDGYIACGSETNEVYCYHKSLPLPITSHKFESIDPVSGHSTSDDNNGQFVSSVCWKKKSNMLVAANSIGIVKLLQMV 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00348 1002 Gene3D - 660 1002 IPR015943 GO:0005515
Adu02g00348 1002 SMART WD40_4 681 716 IPR001680 GO:0005515
Adu02g00348 1002 SMART WD40_4 812 851 IPR001680 GO:0005515
Adu02g00348 1002 SMART WD40_4 727 766 IPR001680 GO:0005515
Adu02g00348 1002 SMART WD40_4 954 1000 IPR001680 GO:0005515
Adu02g00348 1002 SMART WD40_4 904 943 IPR001680 GO:0005515
Adu02g00348 1002 SMART WD40_4 769 809 IPR001680 GO:0005515
Adu02g00348 1002 SMART WD40_4 855 893 IPR001680 GO:0005515
Adu02g00348 1002 PRINTS G protein beta WD-40 repeat signature 753 767 IPR020472 -
Adu02g00348 1002 PRINTS G protein beta WD-40 repeat signature 796 810 IPR020472 -
Adu02g00348 1002 PRINTS G protein beta WD-40 repeat signature 880 894 IPR020472 -
Adu02g00348 1002 MobiDBLite consensus disorder prediction 1 23 - -
Adu02g00348 1002 ProSitePatterns Trp-Asp (WD) repeats signature. 880 894 IPR019775 -
Adu02g00348 1002 Gene3D Transferase(Phosphotransferase) domain 1 255 506 - -
Adu02g00348 1002 SUPERFAMILY WD40 repeat-like 688 997 IPR036322 GO:0005515
Adu02g00348 1002 PANTHER PROTEIN SPA1-RELATED 2 2 1002 IPR044630 GO:0009640
Adu02g00348 1002 SUPERFAMILY Protein kinase-like (PK-like) 255 494 IPR011009 -
Adu02g00348 1002 ProSiteProfiles Protein kinase domain profile. 159 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00348 1002 ProSiteProfiles Trp-Asp (WD) repeats profile. 862 902 IPR001680 GO:0005515
Adu02g00348 1002 SMART serkin_6 185 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00348 1002 Pfam WD domain, G-beta repeat 771 809 IPR001680 GO:0005515
Adu02g00348 1002 Pfam WD domain, G-beta repeat 861 893 IPR001680 GO:0005515
Adu02g00348 1002 ProSiteProfiles Trp-Asp (WD) repeats profile. 776 818 IPR001680 GO:0005515
Adu02g00348 1002 PANTHER LIGASE COP1, PUTATIVE-RELATED 2 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00348 Adu-Chr2 3719870 3725949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00348 773 942 Miscellaneous Gene Families AT5G08390 24.561 1.86e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00348 K16240 - gmx:100802144 1289.25