Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00317 ATGGCCTCTGAAGCCGATTTTGGCTTCGCCTTCAACGACATTAACTTCTCCGACCGTATCCTCCGCATTGAGATCACCGACGACGAGCCTGTCGACGACCGTATCCGCCGCATCAAGATCACAGACGACGGACCTGTCGACGCCCCACCGGACTCCGATGCATGCGCCACCATCGCTGACTGGGTTCGCCACCGCAAGCGCCGCCGCTACGACATCAAGAAGGAAAACGATGTGGATCATGCTACGTTGCCAGAGGAACAAGTTTTGAACAAGTATCAACCTGATGCAGATGATTTTTTGGAATGTGAAAACGAAGACGATGATCTTGTTGTGATTGTTGAAGAATCCCCTTCAGGTGATGAAGCCGTTGATGCAGATTGGAATTTTGTTCGCTCTGTGAAAACATTACATATCAGTTCCCCTATCTTGGCTGCTAAAAGTCCCTATTTCTACGAGCTTTTTTCAAATGACACAAAGCAGTCAGAACAAAGACATGTCACCCTGAAAATTAATGCCTCTGAAGAAGGTGCTCTTATGCAGTTATTGAATTTTATGTATAGTAGTACATTGACCAATACTTCAGCGCCAGCTGTGCTGGATGTGTTGATGGTTGCTGATAAATTTAAAGTTGCATCATGCATGAGACACTGTAGCTCGTTGTTGCGGAATATGCCGATGACAACTGACTCTGCATTGCTATATATAGATCTTCCTTCTAGTGTCGAAATGGCTGAAACAGTCCAACCATTGTGTGATGCAGCAAAGCTGTTTCTTGTTAATAAATTCAAGGATATAGCCAAGTATCAAGAGGAGCTAATGACCTTGCCATTAGCTGGTATAGAAGCAGTAATTTCTAGTGATGATCTCCAGGTTGCATCTGAAGATGTTGTATATGACTTTATCTTGAAATGGGCTAGAAGTCACTACGGCAAACTGGAGGAAAGGCGACAAGTCCTGAGTAATCGGCTCTCACATTTTATCCGGTTCCCTCACATGAGCACCCGGAAACTTAGAAAGGTCTTAACGTGTAAGGACTTTGATTATGAGGTTGCATCCAATCTTGTACTTGAGGCCCTTTTTTACAAGGTTGAGGTTCCACACCGCCAACGGTCACTAGCAGCAGGAGATTCTTCCTCATTGTACCATCGTTTTGTTGAGCGGGCATTCAAGTATCGCCCAGTTAAGGTAGTAGAATTTGAATTTCCCCATAAGCAGTGTATTGTATACTTGGACTTGAAGCGGGAGGAATGTGCGAATTTGTTCCCATCCGGCCGGGTGTATTCTCAGGCATTCCATTTAGGCGGACAAGGGTTTTTTCTGTCAGCACATTGCAACATGGATCAACAGAGTTCTTTCCATTGCTTTGGGCTGTTTCTTGGAATGCAGGGAAAGGGTTCAGTTGGCTTTACCGTCGAGTATGAATTTGCGGTGAGGTCTAAACCGATGGAGGATTTCGGAAGCAAATACAAAGGCAGCTATACATTCACAGGAGGAAAGGCTGTTGGCTATAGAAATTTGTTTGCCATTCCATGGACTTCATTCATGGCTGAGGATTGTCGTTACTTCATTAATGGTGTCCTACACCTTAGAGCTGAGCTAACCATCAGAAACTGA 1614 0.4486 MASEADFGFAFNDINFSDRILRIEITDDEPVDDRIRRIKITDDGPVDAPPDSDACATIADWVRHRKRRRYDIKKENDVDHATLPEEQVLNKYQPDADDFLECENEDDDLVVIVEESPSGDEAVDADWNFVRSVKTLHISSPILAAKSPYFYELFSNDTKQSEQRHVTLKINASEEGALMQLLNFMYSSTLTNTSAPAVLDVLMVADKFKVASCMRHCSSLLRNMPMTTDSALLYIDLPSSVEMAETVQPLCDAAKLFLVNKFKDIAKYQEELMTLPLAGIEAVISSDDLQVASEDVVYDFILKWARSHYGKLEERRQVLSNRLSHFIRFPHMSTRKLRKVLTCKDFDYEVASNLVLEALFYKVEVPHRQRSLAAGDSSSLYHRFVERAFKYRPVKVVEFEFPHKQCIVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQGKGSVGFTVEYEFAVRSKPMEDFGSKYKGSYTFTGGKAVGYRNLFAIPWTSFMAEDCRYFINGVLHLRAELTIRN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00317 537 SUPERFAMILY TRAF domain-like 424 535 - -
Adu02g00317 537 CDD BTB_POZ_ZBTB_KLHL-like 134 208 - -
Adu02g00317 537 SMART BTB_4 107 225 IPR000210 GO:0005515
Adu02g00317 537 Pfam BTB/POZ domain 134 222 IPR000210 GO:0005515
Adu02g00317 537 Gene3D Potassium Channel Kv1.1; Chain A 103 245 IPR011333 -
Adu02g00317 537 Pfam BTB And C-terminal Kelch 248 340 IPR011705 -
Adu02g00317 537 ProSiteProfiles BTB domain profile. 125 194 IPR000210 GO:0005515
Adu02g00317 537 Gene3D - 257 363 - -
Adu02g00317 537 SMART BACK_2 240 342 IPR011705 -
Adu02g00317 537 PANTHER OS02G0260700 PROTEIN 2 536 IPR045890 -
Adu02g00317 537 SUPERFAMILY POZ domain 129 222 IPR011333 -
Adu02g00317 537 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 2 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00317 Adu-Chr2 3432106 3436408 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00317 - - cpap:110807101 786.178