Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00148 ATGGAGTTGCAGGTAGGGCAAGGAGAACAACAACAGCAGCAAAGAGAGGAGCTTCTTCGTGTTGAAGTTTCCGGACTGGAAGAAGAAGATGAAGAAATGGATGATGGTGATGATGATGCTGAAGAAGGTTCCTCTCGTCTTCCTGAGGGTTACTACGAAGTCGAAGCCATTCGTAAAAGGAGGGTCCGCAAGGGTGAGGTTCACTACTTGGTCAAATGGCTTGATTGGCCTGAGACTGCCAACACATGGGAGCCTCTGGAAAATCTGGAGGGTGTTTCTGAAATCGTCTCGGCTTTCGAGGAAAGCTGGCATTCAGCGCCGCAACGCAGGCGTAAGCGAAAGAATGTTGTTCAACATTCTGCGCTTAAGAAGAGGCTGGAGCGATCCGAGACTCCGTACAGCCTCAGACGATTTCCAGCTTCAACATCCACTAGCAACCATGCTCCATCAGCTCCTCCTCCTCAAATAACGGGCCTAAATTATGGTGACATCCCTGCCTTTCCACAGCCAGTGCTTTTCGCTGACGAAGTGGAAAACAACGGGGATGCTAGCATTGTCAGAAATGCTGCACCCCCAAATGTGAGTAGGCTTGGAAATGCTTCCGGGTCAGTCGGTGCTGCAAATGAAGAGCCCGATTATGATCCGAAGCTTAGCGAGCTTAGAGCATCAACAGCTAATGGCTCTGATGCTGACAGGCTCGCCATACAGTTCCAAGATCCTAATCCCTCGTTAGGGGATGGTCATGGAGAGGGGCAACCAAATGGTGGTTGCATGGAATCAAGCCAGGGTGGCGGCAGCAAAGGAGCCAGAAAGAGAAAATCTGGTTCTGTTAAGAGGTTTAACCGAGATTTACTCTCTGGTGAGCCTCTTAGTTTGCAGAATCCAGCTGGCACATCTGATGGCTCGGCTCAACAGGTGGTAGCCAGTAATAGGAAGGTGGATCTGCCCAGACCTTCCAACCCGATCGTAAAGATCCTAAAGCCAGTGAACTGTTTGCCGCCAATTCCAATCAGCACTCAGGATGTTGTGGTGAGCTTCTTGGCGATAAGGGCTGACGGCTCGGAGATATTGGTGGACAACCATTATCTCAAGAGGAATTATCCAATCATGCTGATCGATTTCTATGAGCAGCATCTCCGATACAGTCCTATGTCGTGA 1158 0.4991 MELQVGQGEQQQQQREELLRVEVSGLEEEDEEMDDGDDDAEEGSSRLPEGYYEVEAIRKRRVRKGEVHYLVKWLDWPETANTWEPLENLEGVSEIVSAFEESWHSAPQRRRKRKNVVQHSALKKRLERSETPYSLRRFPASTSTSNHAPSAPPPQITGLNYGDIPAFPQPVLFADEVENNGDASIVRNAAPPNVSRLGNASGSVGAANEEPDYDPKLSELRASTANGSDADRLAIQFQDPNPSLGDGHGEGQPNGGCMESSQGGGSKGARKRKSGSVKRFNRDLLSGEPLSLQNPAGTSDGSAQQVVASNRKVDLPRPSNPIVKILKPVNCLPPIPISTQDVVVSFLAIRADGSEILVDNHYLKRNYPIMLIDFYEQHLRYSPMS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00148 385 MobiDBLite consensus disorder prediction 287 309 - -
Adu02g00148 385 SUPERFAMILY Chromo domain-like 46 110 IPR016197 -
Adu02g00148 385 Coils Coil 9 29 - -
Adu02g00148 385 Pfam Chromo (CHRromatin Organisation MOdifier) domain 52 101 IPR023780 -
Adu02g00148 385 MobiDBLite consensus disorder prediction 135 153 - -
Adu02g00148 385 ProSiteProfiles Chromo and chromo shadow domain profile. 52 111 IPR000953 -
Adu02g00148 385 MobiDBLite consensus disorder prediction 1 48 - -
Adu02g00148 385 ProSitePatterns Chromo domain signature. 69 89 IPR023779 -
Adu02g00148 385 MobiDBLite consensus disorder prediction 1 18 - -
Adu02g00148 385 SMART ChS_2 307 384 IPR008251 GO:0005634
Adu02g00148 385 Gene3D - 26 103 - -
Adu02g00148 385 MobiDBLite consensus disorder prediction 237 313 - -
Adu02g00148 385 MobiDBLite consensus disorder prediction 23 42 - -
Adu02g00148 385 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 9 383 IPR044251 GO:0006325|GO:0031507
Adu02g00148 385 SMART chromo_7 51 104 IPR000953 -
Adu02g00148 385 MobiDBLite consensus disorder prediction 132 162 - -
Adu02g00148 385 MobiDBLite consensus disorder prediction 185 214 - -
Adu02g00148 385 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 9 383 - -
Adu02g00148 385 CDD CD_CSD 52 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00148 Adu-Chr2 1650421 1653366 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00148 - - adu:107472716 714.146