Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00134 ATGGCCGCGTTGATGATGGTTGGTGCCACTGCTACAGTTACTCCCTGGGCGAAGGTGGTTGCTCCACCCATCATTCTCCATCACCATCGAAGAATCACCGCCACCTTCTTCCTCCGAAGAGCTTTCTCACTCAAAGCTTCTTCTCTCTCTCATCAACACCAAGAACCTTCACCCGTTCGCGTCCGTTTCGCGCCTTCTCCTACCGGTAACCTCCACGTCGGCGGCGCCAGAACTGCACTCTTCAATTACTTGTTCGCAAGGTCCAAAGGTGGGACATTTGTGTTGAGAATTGAGGATACTGACTTGGAGAGGTCTACCAAGGAATCTGAGGAAGCCCTTCTTCGGGATCTTTCATGGCTTGGCCTTGGATGGGATGAAGGCCCTGGTGTTGGTGGGGATTATGGTCCATATAGGCAATCCGAGAGGAACTCTTTGTACAAACAATATGCTGAGAAACTCCTCGAATCTGGCCAGGTTTATCGATGCTTTTGTTCTAATGAGGAACTAGAGAAAATGAAGGAGGTTGCCAAATTAAAGCAACTGCCTCCAGTGTACACAGGTAAATGGGCCAATGCAACAAATGAGGAAGTAGAAGAAGAGCTGACAAAGGGAACTCCTTATACATATCGGTTTCGTGTCCCCAAAGGAAATTTAAAAATTAATGACATAATACGTGGCGAAGTTAGTTGGAGCTTGGATACGCTTGGAGATTTTGTGATAATGAGGAGTAATGGTCAGCCTGTTTACAACTTTTGTGTAACAGTGGATGATGCTACCATGGCTATTTCCCATGTTATAAGAGCAGAGGAGCATTTACCAAACACTCTAAGGCAGGCATTAATATATAAGGCTTTAGGTTTTCCCATGCCTTATTTTGCACATGTTTCCTTGATTTTGGCTCCTGATCGGAGTAAATTATCAAAACGACATGGTGCAACATCAGTGGGTCAGTTCAGGGAGATGGGATACCTACCTGAAGCAATGGTGAATTACCTTGCATTATTAGGCTGGGGTGATGGAACTGAAAATGAGTTTTTCACCCTTAATCAACTCGTTGAAAAATTCACTATTGAACGTGTTAACAAAAGTGGTGCTGTTTTTGATTCCACGAAGTTAAGGTAA 1122 0.4474 MAALMMVGATATVTPWAKVVAPPIILHHHRRITATFFLRRAFSLKASSLSHQHQEPSPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGTFVLRIEDTDLERSTKESEEALLRDLSWLGLGWDEGPGVGGDYGPYRQSERNSLYKQYAEKLLESGQVYRCFCSNEELEKMKEVAKLKQLPPVYTGKWANATNEEVEEELTKGTPYTYRFRVPKGNLKINDIIRGEVSWSLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFTLNQLVEKFTIERVNKSGAVFDSTKLR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00134 373 CDD GluRS_core 59 373 IPR033910 GO:0006424|GO:0008270
Adu02g00134 373 PANTHER GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED 42 373 - -
Adu02g00134 373 Pfam tRNA synthetases class I (E and Q), catalytic domain 59 372 IPR020058 GO:0004812|GO:0005524|GO:0043039
Adu02g00134 373 PRINTS Glutamyl-tRNA synthetase signature 62 74 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Adu02g00134 373 PRINTS Glutamyl-tRNA synthetase signature 91 104 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Adu02g00134 373 PRINTS Glutamyl-tRNA synthetase signature 263 271 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Adu02g00134 373 PRINTS Glutamyl-tRNA synthetase signature 76 87 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Adu02g00134 373 PRINTS Glutamyl-tRNA synthetase signature 247 257 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Adu02g00134 373 PANTHER GLUTAMATE--TRNA LIGASE 42 373 - -
Adu02g00134 373 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 65 76 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Adu02g00134 373 TIGRFAM gltX_bact: glutamate--tRNA ligase 59 372 IPR004527 GO:0000166|GO:0004818|GO:0005524|GO:0006424
Adu02g00134 373 Gene3D HUPs 49 373 IPR014729 -
Adu02g00134 373 SUPERFAMILY Nucleotidylyl transferase 59 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00134 Adu-Chr2 1449986 1454121 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00134 K01885 - gmx:100810730 643.654