Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00027 ATGCAAGCACAACTCTTTTCACTCGCACACTGCACTCTACCTGTGTCCAGATTCCCAAACAATGCAACTCCTCCAAATTTTGCAACTTTTCAACAATCCCATCACTCCTCCAAGCTCAGTTTCAATGTGGGTCTCAATCATTTGCTTCAAAAATCTAATTTTTTGAGTCAAAGCGTACCTGGTTTGATGAGTAGCTGTGATGGTTATGTGGGTGTAGTAGCAGAATGTGGTCCCTTTAATGGAGAAAGTGATGTTGGCGATTGTGATGATGGGTTTTACATAAGAAGGTGTGTTGAGCTTGCAAGAAAAGCTATTGGCTTCACAAGCCCCAATCCAATGGTGGGGTGTGTTATTGTGAAGGATGGGAAAATTGTTGGTCAAGGGTTCCACCCTAAAGCAGGTCAACCGCATGCTGAGGTGTTTGCCTTGAGAGATGCTGGCGATTTGGCGGAGAATGCCACGGCTTATGTGAGCTTAGAACCTTGTAATCATTTTGGAAGGACTCCACCTTGCACTGAAGCTTTAATCAAAGCCAAAGTGAAAAAAGTGGTGGTTGGGATGGTGGATCCAAATCCCCTTGTGGAATCCAAAGGGTTGGCTAGATTGAGAGATGCAGGTATTGAAGTTGTTGTCGGTGTAGAGGAAGAGTTATGCAAGAGCCTTAACGAGGCCTTTGTTCATCGCATGTTAACCGGAAAACCTCTCCTTACATTGAGATATTCTCTTTCTGTCAATTGGAATTTTTCAGACTTACTTGGAGATGGAGTTACAGAATGTGGTGGATACTATTCACGTTTATTGCAAGAATATGATGCAGTGATACTTTCCTCTTCCTTATTCAGTGGGAACATATCAATACCTGCATCTCAAGAACCTGGAGCAAATCAGCCGCTCCGGATTGTAATACATAAGGATTCTAGTTCTTCAAATGAAATTCCACTTGCTGTCAATGAAGTTACTGATAAAGTGATAGTTTTTACTGATAATGGAACAGCAACCACTCTAGAACTGGCCGGAAAAGGAATTGAAACCGTCATTTTGGATCAGATAAATCTAGATGTGATTCTGGACTATTGTAATCGACAAGGGATGTGCAGTGTTCTATTAGATTTGAGGGGAAATTCCAGCGAGTTTGAAGAGTTTGTTAAGGAGGGAATTCAGAAGAAAAACATTAGTAAATTTATGATAGAAATTTTACCTATTTGGAATAGAGGTAGTGAGACAGATCCTCTAATACCGGTAAAAAGGTTAGATCAAGGAATCCAAGTGGAAAATTTGAAGTCCAAGTGTTCAGATCAAAATGTTATAATTGAAGGACATTTTAAATTTTAA 1332 0.4032 MQAQLFSLAHCTLPVSRFPNNATPPNFATFQQSHHSSKLSFNVGLNHLLQKSNFLSQSVPGLMSSCDGYVGVVAECGPFNGESDVGDCDDGFYIRRCVELARKAIGFTSPNPMVGCVIVKDGKIVGQGFHPKAGQPHAEVFALRDAGDLAENATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPLVESKGLARLRDAGIEVVVGVEEELCKSLNEAFVHRMLTGKPLLTLRYSLSVNWNFSDLLGDGVTECGGYYSRLLQEYDAVILSSSLFSGNISIPASQEPGANQPLRIVIHKDSSSSNEIPLAVNEVTDKVIVFTDNGTATTLELAGKGIETVILDQINLDVILDYCNRQGMCSVLLDLRGNSSEFEEFVKEGIQKKNISKFMIEILPIWNRGSETDPLIPVKRLDQGIQVENLKSKCSDQNVIIEGHFKF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00027 443 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 88 210 IPR002125 -
Adu02g00027 443 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 93 187 IPR002125 -
Adu02g00027 443 PANTHER RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRD, CHLOROPLASTIC 67 279 - -
Adu02g00027 443 SUPERFAMILY Dihydrofolate reductase-like 262 437 IPR024072 -
Adu02g00027 443 Gene3D Dihydrofolate Reductase, subunit A 228 441 IPR024072 -
Adu02g00027 443 TIGRFAM eubact_ribD: riboflavin biosynthesis protein RibD 95 385 IPR004794 GO:0008835|GO:0009231
Adu02g00027 443 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 137 175 IPR016192 GO:0008270|GO:0016787
Adu02g00027 443 Gene3D Cytidine Deaminase, domain 2 86 227 - -
Adu02g00027 443 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 67 279 - -
Adu02g00027 443 CDD Riboflavin_deaminase-reductase 94 206 - -
Adu02g00027 443 SUPERFAMILY Cytidine deaminase-like 90 229 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00027 Adu-Chr2 382043 384078 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00027 K11752 - gmx:100786393 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00027 02 382043 384078 Adu02g00027 02 382043 384078 ECH