Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03342 ATGAAGAGAGGAGGAGGAGGAGGAGGGAGAGGAGGTAAATTCGAAACGGTTGTATCGTTGAGTAGGCAACGAACCATTCAGGCTCTGGTATTTGTATCGTTATTATACCTCTTGATTTTCATCTTCGAAATCCCCTTCTTCTTCTTCACAAAAACAACTACTAACCGCTCCACCAATGAACTCGCCACCCGCTCTAACAAACTCGATGATTCCCCCACTCTCTTGTCCCAGCGCGTGTCACTCACCAGCCTTCAACCAGAAGGAGAACGACAAACCTACGCCTTCGTTTCGAGAATCTTCGACGATGAAGCCGTGTTGGACCACTCCGACGGACCGATCCACGAAACCGCAAGGCATGCGCGCCAAGAAGGGAAGAAGGTATGGGAGGAGCTTGAATCCGGAATCGAGCAAGGAATCTCAACCGAGGATACGGAAAATCTGATCGGGTCGTGCCCGCTGTCCGTTTCTTTGACCGGGGCGGAGTTCGAGGCCCGAGGGAAGGTAGTGGAGATCCCGTGTGGGCTCACCTTGGGTTCGCACGTGACCGTGGTAGGGAAGCCACGGAAGGCGCACGTGACAGGTTCTTCGAATGGGGAGGCCTGGTACGAGGAGGGAGAAGGAGGAGGAGGGAGGGTGGTTTCGCATTTCGTGATGGAGCTGCAGGGGCTGAGGACGGTTGACGGTGAGGAACCGCCGCGGATACTACATTTTAATCCGCGGTTGAAAGGGGATTGGAGCGGGAAACCGGTGATCGAGCTCAACACGTGTTACAGGATGCAGTGGGGCACCTCCTTGCGCTGTGACGGTTGGAAATCTAGGGCTGATGAAGAAACCGTTGATGGGCTGGTAAAGTGTGAAAAGTGGAGAAAGGATGATAGCACAGATGAAGAGCAATCCAAGGCAGCCTGGTGGATGAAAAGGATGGCTGGCCGGAAATCAGTAACAGCTGACTGGCCATTCCCATTTGCAGAGGACAGCCTATTTGTTCTTACTCTTAGTGCCGGATTCGAGGGCTATCATGTTAATGTTGATGGTAGACATGTTGCTTCTTTTCCTTATCGCACTGGCTTTGCGCTTGAGGATGCCACAGGACTTACTTTGACGGGGGATGTTGATGTTCAGTCTATAGTTGCCGCTTCTCTGCCTTCATCACATCCTAGTTTTTCACCAGAGCAATATCTTGAAATGTCACCAACATGGATTTCCCCGACACTTCGTGACTCTAATGTAGAGATGCTTATTGGCATTCTCTCTGCTGGAAACCATTTTGCTGAGCGTATGGCTGCCAGGAAGACGTGGATGCAGCATAGTCTTATCAAATCTTCACAATTGGTGGCTCGTTTCTTTGTAGCACTGCACAAAAGGAAAGAAGTTAATGTACAATTGAAGAAGGAGGCGGAGTATTTTGGTGATATAATTATAGTGCCTTACATGGATAACTACGAACTTGTTGTGTTGAAAACTGTTGCGATATGTGAATATGGAGTTCACAAGGTGTCTGCTAAACATATCATGAAAGGTGACGATGACACGTTCATAAATCTGGATGCCTTTTTAGACAAAGCAAGACAGGTTCCAGATTATATAAGCTTTTATTTTGGGAACATGAATTACCACCACAAGCCTTTGCGGCATGGTAAATGGGCTGTGACATATGAGGAGTGGCCAGAAGAGGATTATCCTCCATATGCTAATGGACCGGGTTATATTTTGTCTTCTGATATAGCAGAGTACATTGTATCTGAATTTGAGATGCATAGATTAAGATTATTTAAGATGGAAGATGTGAGTATGGGAATGTGGGTAGGGCAATTTAACAGCACAAAACCGGTGCGCTATCTGCATAGCTTGAAGTTCTGCCAATATGGCTGCATAGAAGGATATTTCACAGCACATTACCAATCCCCTAGGCAGATGTTGTGCTTGTGGGAAAAATTGGAGAACCAAACATGGCCTCAGTGCTGCAACATGAGATAA 1977 0.477 MKRGGGGGGRGGKFETVVSLSRQRTIQALVFVSLLYLLIFIFEIPFFFFTKTTTNRSTNELATRSNKLDDSPTLLSQRVSLTSLQPEGERQTYAFVSRIFDDEAVLDHSDGPIHETARHARQEGKKVWEELESGIEQGISTEDTENLIGSCPLSVSLTGAEFEARGKVVEIPCGLTLGSHVTVVGKPRKAHVTGSSNGEAWYEEGEGGGGRVVSHFVMELQGLRTVDGEEPPRILHFNPRLKGDWSGKPVIELNTCYRMQWGTSLRCDGWKSRADEETVDGLVKCEKWRKDDSTDEEQSKAAWWMKRMAGRKSVTADWPFPFAEDSLFVLTLSAGFEGYHVNVDGRHVASFPYRTGFALEDATGLTLTGDVDVQSIVAASLPSSHPSFSPEQYLEMSPTWISPTLRDSNVEMLIGILSAGNHFAERMAARKTWMQHSLIKSSQLVARFFVALHKRKEVNVQLKKEAEYFGDIIIVPYMDNYELVVLKTVAICEYGVHKVSAKHIMKGDDDTFINLDAFLDKARQVPDYISFYFGNMNYHHKPLRHGKWAVTYEEWPEEDYPPYANGPGYILSSDIAEYIVSEFEMHRLRLFKMEDVSMGMWVGQFNSTKPVRYLHSLKFCQYGCIEGYFTAHYQSPRQMLCLWEKLENQTWPQCCNMR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03342 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 169 377 IPR013320 -
Adu01g03342 658 SMART Gal_bind_lectin_2 171 378 IPR001079 GO:0030246
Adu01g03342 658 Pfam Galactoside-binding lectin 169 377 IPR001079 GO:0030246
Adu01g03342 658 Gene3D - 167 377 - -
Adu01g03342 658 Gene3D - 406 654 - -
Adu01g03342 658 Pfam Galactosyltransferase 425 604 IPR002659 GO:0006486|GO:0016020|GO:0016758
Adu01g03342 658 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 15 658 IPR002659 GO:0006486|GO:0016020|GO:0016758
Adu01g03342 658 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 15 658 - -
Adu01g03342 658 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 167 379 IPR001079 GO:0030246
Adu01g03342 658 CDD GLECT 168 377 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03342 Adu-Chr1 106665265 106669784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03342 13 658 Glycosyltransferase AT1G74800 57.840 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03342 K20843 - rcu:8258151 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03342 01 106665265 106669784 Adu01g03342 01 106665265 106669784 ECH