Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03226 ATGTTTGGTTCAAAGAAGTCTCCTTTAAAGGTTGCTAAATCTGGGTCAAACCCATTTGATTCTGATGATGAGGATCTTGTAAAGGATAACAAGAAGAATAGTTCTACGAAGAAGGCCTCTTCGGAGCGTGCACTTGTTTCTTTAGAAAACACCAATCCTTTTGATGATGATGTTGTTGCTAATAAGAACTCTTCGTCATCTTCGTATGCTCTACGATCGGCTGACCGGAATAGGTATAAGAATGATTTCCGTGACTCTGGTGGGTTAGAGAATCAATCAGTGCAAGAACTGGAGAGCTATGCTGTTTACAAGGCTGAGGAGACTACAAAATCGGTCAACAATTGTTTGAAGATAGCAGAGAACATAAGAGAGGATGCTACCAAGACTCTGGTCACCCTTCATCAACAAGGCGAACAAATCACCAGAAGTCATTATGTTGCTGCTGACATTGATCAAGATTTAAGCAGGGGAGAGAAGCTTTTGGGAAGTCTTGGTGGTCTCTTCTCGAAGACTTGGAAACCAAAAAAGACACGCGCAATTAGAGGACCTGTTCTTTTTCCAGATGATCCAGTAAGAAGAAATGGTAATCACTTGGAGCAGAGAGAGAAGTTAGGATTGACTTCTGCACCCAAAAGGCAGTCCAATCTGCGGGCACCGCCTCCCGAACCGACGAACGCGATTGAAAAAGTTGAGGTTGAGAACAAGAAGCAAGATGATGCGCTTTCAGATTTAAGTGACATATTGGGAGAGCTCAAAGGCATGGCTATTGACATGGGCTCTGAAATTGAGAGGCATAACAAGGCTCTGAATCATATGTATGATGATGTGGATGAGTTGAATTTCCGAATGAAAGGTGCTAACCAACGTGGCCGCCGTTTACTTGGCAAATAG 891 0.431 MFGSKKSPLKVAKSGSNPFDSDDEDLVKDNKKNSSTKKASSERALVSLENTNPFDDDVVANKNSSSSSYALRSADRNRYKNDFRDSGGLENQSVQELESYAVYKAEETTKSVNNCLKIAENIREDATKTLVTLHQQGEQITRSHYVAADIDQDLSRGEKLLGSLGGLFSKTWKPKKTRAIRGPVLFPDDPVRRNGNHLEQREKLGLTSAPKRQSNLRAPPPEPTNAIEKVEVENKKQDDALSDLSDILGELKGMAIDMGSEIERHNKALNHMYDDVDELNFRMKGANQRGRRLLGK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03226 296 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 296 - -
Adu01g03226 296 SUPERFAMILY SNARE fusion complex 92 162 - -
Adu01g03226 296 SUPERFAMILY SNARE fusion complex 231 294 - -
Adu01g03226 296 SMART tSNARE_6 226 293 IPR000727 -
Adu01g03226 296 SMART tSNARE_6 97 164 IPR000727 -
Adu01g03226 296 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 231 293 IPR000727 -
Adu01g03226 296 MobiDBLite consensus disorder prediction 183 224 - -
Adu01g03226 296 MobiDBLite consensus disorder prediction 39 73 - -
Adu01g03226 296 CDD SNARE_Qc 235 292 - -
Adu01g03226 296 MobiDBLite consensus disorder prediction 1 73 - -
Adu01g03226 296 MobiDBLite consensus disorder prediction 192 206 - -
Adu01g03226 296 Gene3D - 88 165 - -
Adu01g03226 296 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 296 - -
Adu01g03226 296 MobiDBLite consensus disorder prediction 17 38 - -
Adu01g03226 296 CDD SNARE_SNAP25N_23N_29N_SEC9N 100 163 IPR044766 GO:0005484|GO:0031201
Adu01g03226 296 Gene3D - 228 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03226 Adu-Chr1 104661924 104663432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03226 K18211 - gmx:100809874 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03226 01 104661924 104663432 Adu01g03226 01 104661924 104663432 ECH