Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03206 ATGGATTCGAACGCCATGGCACAACTCCAAAGACCTTCAACCGAAACCCCAACCCTGCTCGATTCTCTGGGCGAAGAAATCATCAGAATTGTAGCCCCAGTCTCAATCTGCATGTTCCTCGTTGTAATCCTCGTCTCCATTCTCAACACGGGTGACTCTTCCTTCTCCGTTTCCAGCATCGCCACCATTGCGTACACCGAGACAACCTCCGATTCCTCCTGGGACAAGTTCCTAGGTGCCCTGCTCAACTCCCTCGCCTTCGTCGTCGTCGTCACCGTGGCTACCTTCGTCCTCGTCCTCCTCTTCTATTTCAGGTGCACTGGCTTCCTCAAAATCTACATGGGTTTCTCCGCTTTCGTCGTTCTAGGGTTCCTCGGCGGTGAAGTTTTCATCTTTTTGATTCAGCATTTTAGTACCCCAATTGATTGCTTCACTTTCTTGTTGCTTCTGTGTAATTTTGCTGTTGTTGGTGTTATGGCTGTCTTTATGTCGAAAATGGCTATTATTGTTACTCAGAGTTACTTGGTTGTTATTGGGATTCTTGTTGCTTATTGGTTCACTATGTTGCCTGAATGGACCACTTGGGCCATGCTTGTTGCCATGGCATTGTATGATCTTGCTGCCGTTTTGTTGCCTATTGGTCCCTTGAGGCTTCTCGTTGAGCTCGCCATATCGCGGGACGAGGAGATTCCGGCTTTGGTTTACGAAGCTAGGCCTGTGAATGTTGAGAATTTGGATCCTAGGGTTGCTGTTGCTCAGAGGAGGCTGTGGAGAGAGAGGAGGGTTACCGAGAATTCAAATCTCCGGGGTGATGCTAATGTGAATGTTAGTAATAATAATGCCTTAGGTCTTGGTGCCAATGCTGAGTTGAACCCTGGTTCGGATTCAAACAGTAATAATCCCAGTTCGGCTGGGGAAGATGCTATTTTGGATTCGAATTTGGGTTCTAGTACTTCTTATGGGATCTATAGTGACAGGAATTTGGTTAGAGCTGAAGAGGGGCGAGTTCAGGAGACCAATTCAGAGATTACTACCCCATTGATTGGTCACGGAGTGAATGTTCGGATACATAGCAGAGCAGAAAATGTGGATGCATCAGATGAGAATTTGATGTTGGAGGGAATTGGATTGGCTTCATCCGGCGCAATCAAGTTAGGGCTGGGCGATTTCATCTTCTATAGTGTTTTGGTTGGCAGGGCTGCAATGTATGATTTTATGACTGTGTATGCTTGTTATCTCGCTATCATTGCTGGTCTGGGGATAACACTGATGCTTTTGGCTTTTTATCAGAAGGCTTTGCCTGCTCTTCCCGTGTCAGTCGCACTGGGGGTGCTGTTTTATTTCTTGACCAGGCTCTTACTTGAAGTGTTTGTAGTACAATGTTCCATGAATCTTCTGATGTTTTAA 1407 0.4641 MDSNAMAQLQRPSTETPTLLDSLGEEIIRIVAPVSICMFLVVILVSILNTGDSSFSVSSIATIAYTETTSDSSWDKFLGALLNSLAFVVVVTVATFVLVLLFYFRCTGFLKIYMGFSAFVVLGFLGGEVFIFLIQHFSTPIDCFTFLLLLCNFAVVGVMAVFMSKMAIIVTQSYLVVIGILVAYWFTMLPEWTTWAMLVAMALYDLAAVLLPIGPLRLLVELAISRDEEIPALVYEARPVNVENLDPRVAVAQRRLWRERRVTENSNLRGDANVNVSNNNALGLGANAELNPGSDSNSNNPSSAGEDAILDSNLGSSTSYGIYSDRNLVRAEEGRVQETNSEITTPLIGHGVNVRIHSRAENVDASDENLMLEGIGLASSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLMLLAFYQKALPALPVSVALGVLFYFLTRLLLEVFVVQCSMNLLMF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03206 468 PRINTS Presenilin family signature 31 41 IPR001108 GO:0004190|GO:0016021|GO:0016485
Adu01g03206 468 PRINTS Presenilin family signature 188 195 IPR001108 GO:0004190|GO:0016021|GO:0016485
Adu01g03206 468 PRINTS Presenilin family signature 205 222 IPR001108 GO:0004190|GO:0016021|GO:0016485
Adu01g03206 468 Pfam Presenilin 24 458 IPR001108 GO:0004190|GO:0016021|GO:0016485
Adu01g03206 468 PANTHER PRESENILIN 18 468 - -
Adu01g03206 468 Gene3D Presenilin 363 460 IPR042524 -
Adu01g03206 468 MobiDBLite consensus disorder prediction 285 310 - -
Adu01g03206 468 SMART psh_8 78 454 IPR006639 GO:0004190|GO:0016021
Adu01g03206 468 PANTHER PRESENILIN 18 468 IPR001108 GO:0004190|GO:0016021|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03206 Adu-Chr1 104212168 104213574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03206 1 468 Miscellaneous Gene Families AT2G29900 58.723 6.78e-160 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03206 K04505 - gmx:100799643 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03206 01 104212168 104213574 Adu01g03206 01 104212168 104213574 ECH