Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03194 ATGAGGTGGGAAAAGGTTCAGATGAACCCTTTAGAGGGCAATGATGGAGGAGGGCCAGGGAAGAGGTGGGGACACACCTGCAACGCCATTAGAGGTGGCAGACTTGTCTATGTCTTCGGTGGTTATGGCAAAGATAACTGTCAGACCAACCAAGTTCATGTCTTTGACACTGTGAAACAGACTTGGAGCCAACCTGCAATAAAAGGCACCCCGCCTACTCCTAGAGACAGCCATACTTGCACTGCAATTGGTGATAATCTGTATGTGTTTGGGGGTACCGATGGCATGAACCCGTTGAAGGATTTGCATATTCTAGACACTTCTTCAAATACGTGGATATCTCCAACTATAAGAGGCGAAGGGCCAGAGGCACGGGAGGGTCATAGTGCTGCAGTTGTTGGCAAACGGCTATTCATCTTTGGTGGTTGTGGAAAATCTGCAGATAATAATACTGAAGTCTACTATAATGATCTTTATATATTGAATACAGAAACATTTGTATGGAAGTGTGCTCAAACATCAGGCACTCCACCATCTCCTCGCGATAGCCATACTTGCTCGTCTTGGAAAAACAAAATTATCGTGTTAGGGGGTGAAGATGGTCATGATTATTACTTGTCTGATGTCCACATCCTTGATACTGATACTCTAATTTGGAGGGAGCTGAGTACATCAGGCCAACTGTTGCCTCCACGAGCTGGTCATTCTACTGTCGCTTTTGGCAAGAACTTGTTTGTATTTGGCGGATTTACGGATGCACAAAACCTATACAATGACCTCTATATGCTTGACATTGATACTGGTATTTGGACAAATGTTGCAACGACTACCAATGGCCCTTCTGCTCGATTTTCTGTAGCCGGTGACTGTTTAGACCCATTTGTGGGCGGTGCTCTTGTGTTCATCGGTGGTTGTAATAAAAGCCTCGAGGCCCTGGACGACATGTATTTCCTCTACACAGGGATTGCTAGGGAAAGCGAACAGAGACCAGAGAAGTTATCTTTAAGAAAGCAGTTGAAACTAAAATGCCAAGAGCAAAATACCAATCCTGTTCAAAATCAAGTTCTGGTTAGATATGGAGTCGGTGCTGATGTTAGCCCGCTCATGACAGTGTTGAATTATAGCCAGCCAAGTAGACTAAATCTCCCAGTAAATCAAGGCTTCACTCCTGGAAAGAAAATGTTTGAATGCAAGGTTACTGAATCCATCTCGGAAGGTTATACTATCGAAACTATTATTGATGGAAAGCTTCTTCGAGGTGTTCTGTTTTCAAATAAGCCAAAGTCTTTGCACCCAGCTGCTAATACTTCAACCAGCAGGAAAAGGGCCGGTGGTGAAACTGATGTTATCTCAAATGGTATACACCCTGATAAATCAAAGATTCCTAAAGTGAACAATCAAGATGAAACAGAAAACAGACAAACAGTTCATGGAGAGAGTTTAGAATCTCATGAACACCGTGCTGAAGGGGTTGCTGCTCTTCTATCAAGCAACCTGACAGCTGCTGACACTTCTGATACCCATAAGGTTTCTGCTAACCCAGAACCTGAACCTGTTTCTTTGAATCGAAATGATGATGGAAAGAATGAAGCACCCCAACCCATAGGTGAAAACGCGAAAAATGATGGAGCAAGTGACATAGTAAGTTCAAAAACTGATGGCCAAACAAGTGTACCAATTTCCAATTTTGAAGTTCCAAGACATGATAACAAAAGCGATGCACCAAACTGCAACTTTGAATTTCTGAAACCTTCTGCACCCATTCGCATTTATGAGGCCTGTTTTATACTGTTTGGCTTGCCCCGAATCAATAGATTAAGCATTCGAGAGCGATCAAATATTTACTTCTTTATCATTGAAATAGGGCACTGA 1872 0.429 MRWEKVQMNPLEGNDGGGPGKRWGHTCNAIRGGRLVYVFGGYGKDNCQTNQVHVFDTVKQTWSQPAIKGTPPTPRDSHTCTAIGDNLYVFGGTDGMNPLKDLHILDTSSNTWISPTIRGEGPEAREGHSAAVVGKRLFIFGGCGKSADNNTEVYYNDLYILNTETFVWKCAQTSGTPPSPRDSHTCSSWKNKIIVLGGEDGHDYYLSDVHILDTDTLIWRELSTSGQLLPPRAGHSTVAFGKNLFVFGGFTDAQNLYNDLYMLDIDTGIWTNVATTTNGPSARFSVAGDCLDPFVGGALVFIGGCNKSLEALDDMYFLYTGIARESEQRPEKLSLRKQLKLKCQEQNTNPVQNQVLVRYGVGADVSPLMTVLNYSQPSRLNLPVNQGFTPGKKMFECKVTESISEGYTIETIIDGKLLRGVLFSNKPKSLHPAANTSTSRKRAGGETDVISNGIHPDKSKIPKVNNQDETENRQTVHGESLESHEHRAEGVAALLSSNLTAADTSDTHKVSANPEPEPVSLNRNDDGKNEAPQPIGENAKNDGASDIVSSKTDGQTSVPISNFEVPRHDNKSDAPNCNFEFLKPSAPIRIYEACFILFGLPRINRLSIRERSNIYFFIIEIGH 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03194 623 Pfam Galactose oxidase, central domain 74 114 - -
Adu01g03194 623 Pfam Galactose oxidase, central domain 22 72 - -
Adu01g03194 623 Pfam Galactose oxidase, central domain 180 225 - -
Adu01g03194 623 Pfam Galactose oxidase, central domain 231 278 - -
Adu01g03194 623 MobiDBLite consensus disorder prediction 429 445 - -
Adu01g03194 623 MobiDBLite consensus disorder prediction 461 487 - -
Adu01g03194 623 MobiDBLite consensus disorder prediction 543 563 - -
Adu01g03194 623 SUPERFAMILY Galactose oxidase, central domain 16 240 IPR011043 -
Adu01g03194 623 PANTHER KELCH REPEAT DOMAIN 1 448 - -
Adu01g03194 623 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 448 - -
Adu01g03194 623 MobiDBLite consensus disorder prediction 1 21 - -
Adu01g03194 623 Gene3D - 152 375 IPR015915 GO:0005515
Adu01g03194 623 Gene3D - 66 151 IPR015915 GO:0005515
Adu01g03194 623 Gene3D - 1 65 IPR015915 GO:0005515
Adu01g03194 623 SMART kelc_smart 35 85 IPR006652 GO:0005515
Adu01g03194 623 SMART kelc_smart 192 242 IPR006652 GO:0005515
Adu01g03194 623 SMART kelc_smart 243 289 IPR006652 GO:0005515
Adu01g03194 623 SMART kelc_smart 86 135 IPR006652 GO:0005515
Adu01g03194 623 MobiDBLite consensus disorder prediction 502 569 - -
Adu01g03194 623 MobiDBLite consensus disorder prediction 427 487 - -
Adu01g03194 623 Pfam Kelch motif 122 166 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03194 49 308 Acyl Lipid Metabolism Gene Families AT3G05420 29.670 4.89e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03194 - - aip:107634676 1170.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03194 01 104007925 104012972 Adu01g03194 01 104007925 104012972 ECH