Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03170 ATGGAGCTGTGGAACAAAGCTCGAAGCTTCGCGGAAGAGGCAGCAAAACGATCTCATGACCTGTCGTTTGGAGCTTCCAAGCTTTCCAAAGAATTCGCCGCTCAAGCTTCCGTCACCGGCATCACCGTCACCACCTTCCGAGATTTCCCTCTTCAAGATGATACTGAATTGTCTGATGTCCCTGCTGTTTCTAATGTTAGGCAGGACCTAACCGATTGGCAGGAGAAACATGCCAAACTTGTTCTTTCTGCAGTCAAGGAAATTTCAAGATTGAGGTATGAGCTGTGTCCACGTGTTATGAAAGAGAGGAAGTTTTGGAGAATATACTTTATACTTGTGAATAATCATATTGCACCCTATGAGAAAAAGTACATGGAAGATGCTAAACTAAAATCATCTGAACAAGTAAAAGATCAGACAGTGATGGAACCATTAGAAGTTGAATTGACCTCTAATCAAGAGGTGCAGGAAGTGAAAAAGGAGACTAAAACTAAAACTTCAACAACTGAGCAAGACTTGGATGTATTTCTTCTGGGAGATGCAGGAGACAGTGACAATGATCAAGATAATGGCAATGGGGGCTTGGATGATGATTTAGACAACCTGGTGGAAAGTTCCGATGATGAGAAATGA 633 0.4234 MELWNKARSFAEEAAKRSHDLSFGASKLSKEFAAQASVTGITVTTFRDFPLQDDTELSDVPAVSNVRQDLTDWQEKHAKLVLSAVKEISRLRYELCPRVMKERKFWRIYFILVNNHIAPYEKKYMEDAKLKSSEQVKDQTVMEPLEVELTSNQEVQEVKKETKTKTSTTEQDLDVFLLGDAGDSDNDQDNGNGGLDDDLDNLVESSDDEK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03170 210 ProSiteProfiles BSD domain profile. 65 117 IPR005607 -
Adu01g03170 210 Pfam BSD domain 71 117 IPR005607 -
Adu01g03170 210 Gene3D BSD domain 44 128 IPR035925 -
Adu01g03170 210 PANTHER BSD DOMAIN PROTEIN 38 208 - -
Adu01g03170 210 PANTHER BSD DOMAIN PROTEIN 1 29 - -
Adu01g03170 210 MobiDBLite consensus disorder prediction 152 210 - -
Adu01g03170 210 MobiDBLite consensus disorder prediction 190 210 - -
Adu01g03170 210 SUPERFAMILY BSD domain-like 36 121 IPR035925 -
Adu01g03170 210 SMART wurzfinal6 65 117 IPR005607 -
Adu01g03170 210 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 29 - -
Adu01g03170 210 PANTHER BSD DOMAIN-CONTAINING PROTEIN 38 208 - -
Adu01g03170 210 MobiDBLite consensus disorder prediction 153 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03170 Adu-Chr1 103564216 103568123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03170 21 185 EF-hand Containing Proteins AT1G69030 50.299 7.04e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03170 - - ahf:112722625 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03170 01 103564216 103568123 Adu01g03170 01 103564216 103568123 ECH