Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03113 ATGGCGAAGCCCCGTAAGCCAAAGAACGAGGACCCTAAACCCGAGAATTCCGGCGCCCTAGTTCACCACCAGAAGCTCTGCCTCTCCATCGACCTCCACAAACGCCTCGTCTACGGGTATACTGAATTGGAGATTGCCGTGCCGGAGATTGGGATCGTTGGCCTGCACGCTGAGAATTTGGGGATTGAGAGTGTTTCCGTCGACGGTGAGCCCACTGAGTTCGAGTATTATCCTCAGCAGCACCAGCAGCAGGCGGAGGACGATGACAGGAGGTGGAGCTCCGTCGATTCGCCTGCCTCGGCTGCTGACGCTGCCGGCTCAGTGTACTTGTCTGCTCTGGAGAAGGAGCTGGTGCCGAATTTGCTCATTAACTGCTGCAAGCCGGCCAAGGCTGAGAGTGAACAGCTCGAGCAGCAGCCGGTCTCTGAAAATGGGTTTCATTCCTCTGCTGAGCCTAAGCAGAATGTAAGAGTCGTTCGTATTAACTATTGGATAGAGAAGGCGGAGACAGGGATACATTTCAAAGATAATGTTCTTCACACTGATAACCAGATTAGGAGAGCGAGGTGCTGGTTCCCTTGTATAGACGACAGTTCACAGCGATGTTGCTACGACCTGGAGTTCACTGTAGCACACAATCTTGTGGCTGTTAGTACCGGAAGCTTGCTATATCAGGTTTTAAGCAAGGATAATCCTCCTCGGAAAACATATGTATATAAATTGGATGTTCCAGTTGCTGCAAGGTGGATATCTTTGGCTGTAGCCCCATTTGAAATTCTTCCTGATCACCAATTCAGTCTTATATCACATATGTGTTTGCTACCTAATCTGTCAAAGATGCGGAATACAGTGGAATATTTTCATAGCGCCTTCAGCTGCTATAAGGATTATCTTTCTGCAGACTTCCCATTTAACTCTTATAAACAAGTTTTCATAGAGCCAGAGATGGCAGTTTCTTCAATGAGTTTAGGAGCATCTATGAATATATTTAGTTCTCAAGTTTTGTTTGATGAAAAGCTTATCGACCAGACCATTGATACAAGGATAAAACTTGCATATGCTCTTGCAAGACAATGGTTTGGTGTATATATCACTCCCGAGGGACCAGATGATGAATGGCTTTTGGACGGGCTTTCTGGTTTCTTGACAGATTTTTTTATTAAGAAACATTTGGGCAATAATGAGGCGCGGTATCGTAGATACAAGGTGGCAATTCTTCAGATGCTGGAAAAGCAGATGGGTCCTGAATCTTTCCGTAGAATTTTGCAAACAGTAGTTTCTCGTGCTCAAGATAAAACACGTTCTGTGAAGACTCTTAGTACTAAGGAGTTTCGGCATTTTGCCAATAAGGTTGGAAATCTTGAACGACCATTTCTTAAAGATTTCTTCCCTCGGTGGGTTGGTTCATGTGGATGCCCTATTTTAAGACGTTTTCAGAAGCCTAAGAAAGGTCTAAAACTAGATGGTTCTGATGATAATGGTGATGTACCTTCCATGGATGTACGCTCCAGTACAGAGTCCCCTTTGTTATGGATCAGAGCAGACCCTGACATGGAGTACCTTGCTGAGATTCATTTTAATCAACCAGTACAGATGTGGATTAATCAATTAGAGAAGGATAAAGATGTTATTGCTCAGGCACAAGCGATTTCTACCTTAGAAGCATTGCCCCAGTTATCATTTTCTGTTGTAAATGCCCTCAACAATTTTCTCACTGACTCCAAGGCTTTCTGGAGAGTACGAATCGAAGCAGCATTTGCATTGGCGAGTTCAGCATCTGAGGAAACTGATTTCGCTGGCCTGCTTCATTTGATTAAATTTTATAAGAGTCGAAGGTTTGACTCTGACATTGGACTCCCAAAGCCAAATGATTTTCATGATTTTGCTGAGTATTTTGTTCTTGAGGCCATTCCACATGCTGTAGCTATGGTCAGAGCTGCAGACAAGAAAAGTCCAAGGGAGGCAATCGAATTTGTTTTACAACTATTGAAGTACAATGACAACAATGGGAACCCTTACTCAGATGTCTTCTGGCTTGCTGCATTGGTTCAGTCGGTTGGCGAGCTTGAATTTGGGAAACAGAGTATCCTCCTATTGTCATCACTTCTTAAACGCATTGACCGGCTGTTACAATGTGATAGCCTCATGCCCAGCTACAATGGAATCTTGACTATCAGTTGTATCCGGACATTGGCTCAGATTGCGCTAAAGCTGTCAGGGTTCATTCCTCTTGATCGTGTGTATGAACTTGTGAAGCCTTTTAGGGATTTGAAGGCAATGTGGCAAGTTCGCATTGAAGCCAGCAGAGCCCTCCTTGATCTTGAATTCCACTTGAAAGGCATTGATGCAGCATTACTTCTATTTATCAAATACGTTCAGGAGGAGCCTTCCTTAAGAGGTGGGCAGTTAAAACTGGCCACTCATGTTATGCGACTCTGTCAGATGAAAGAAGGACCGAGTTCTAATGATGAAATTTCAAGCCAAAATCTCATCTCATTGCTTTGTTTAATGGAAGGACGGATGGCTTTTAATAATGTCTTTCTCCGACACTACTTGTTTTGCATATTACAAGTAATTGCGAAAAGGTATGAATTCAGGAACATATTTGTTCTTGATCCAGATAGTAAACCTTTGGAAGTGCCAAGCTCTACCCAAAATCCAGCACAAGATTTGGCCGTGAGTGAGGGTTTGAAGGATGCGATTGATGAAGTTGCCAAGAATGTACTTCATGAAGCTGGCAAAGAAGTGCATGACGAAGCT 2760 0.4384 MAKPRKPKNEDPKPENSGALVHHQKLCLSIDLHKRLVYGYTELEIAVPEIGIVGLHAENLGIESVSVDGEPTEFEYYPQQHQQQAEDDDRRWSSVDSPASAADAAGSVYLSALEKELVPNLLINCCKPAKAESEQLEQQPVSENGFHSSAEPKQNVRVVRINYWIEKAETGIHFKDNVLHTDNQIRRARCWFPCIDDSSQRCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCLLPNLSKMRNTVEYFHSAFSCYKDYLSADFPFNSYKQVFIEPEMAVSSMSLGASMNIFSSQVLFDEKLIDQTIDTRIKLAYALARQWFGVYITPEGPDDEWLLDGLSGFLTDFFIKKHLGNNEARYRRYKVAILQMLEKQMGPESFRRILQTVVSRAQDKTRSVKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPILRRFQKPKKGLKLDGSDDNGDVPSMDVRSSTESPLLWIRADPDMEYLAEIHFNQPVQMWINQLEKDKDVIAQAQAISTLEALPQLSFSVVNALNNFLTDSKAFWRVRIEAAFALASSASEETDFAGLLHLIKFYKSRRFDSDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGKQSILLLSSLLKRIDRLLQCDSLMPSYNGILTISCIRTLAQIALKLSGFIPLDRVYELVKPFRDLKAMWQVRIEASRALLDLEFHLKGIDAALLLFIKYVQEEPSLRGGQLKLATHVMRLCQMKEGPSSNDEISSQNLISLLCLMEGRMAFNNVFLRHYLFCILQVIAKRYEFRNIFVLDPDSKPLEVPSSTQNPAQDLAVSEGLKDAIDEVAKNVLHEAGKEVHDEA 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03113 920 CDD M1_like_TAF2 23 467 - -
Adu01g03113 920 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 276 475 - -
Adu01g03113 920 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 255 IPR042097 -
Adu01g03113 920 Gene3D Neutral Protease Domain 2 266 404 IPR027268 -
Adu01g03113 920 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 18 402 IPR037813 GO:0005669
Adu01g03113 920 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 476 877 IPR037813 GO:0005669
Adu01g03113 920 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 403 476 IPR037813 GO:0005669
Adu01g03113 920 Gene3D tricorn interacting facor f3 domain 20 254 IPR042097 -
Adu01g03113 920 SUPERFAMILY ARM repeat 317 795 IPR016024 -
Adu01g03113 920 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03113 Adu-Chr1 102707410 102719636 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03113 K03128 - gmx:100792795 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03113 01 102707410 102719636 Adu01g03113 01 102707410 102719636 ECH