Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03105 ATGGGTACTGGAGCAATCGGAGGGAGCCGTTTCACCAATGGGGAAGCTGAGAACAGTGTTCACAAGCAAGCTGAACAAGCTCCCATTGAACGGTTTGTAGGTAGAAGCCAAGACTTGCTCTCTGATGGAAGCAATGCAGTAACGGTAGACCCTGGAGAACAGTCACGCCCACCCGTAGCCCCTGCAAAGAGCCACCAGAAGGATCTAACATTTCAGGATATGTATCTAAACCAATATGCGTTCGATGATGAGGACGACGATGACAGTGATTGGGAGCCCTTTCAACTGCCAGTTAGCAGGGTCGAAGTTATCAAGTGGTTCTGTAAAAATTGTACAATGGCTAACCTTGACGGCGTCGTTCTTTGTGATATATGTGGGGAGCATAAGGATTCTAAAATCGTAAATTTTGGGTTTTTCGCTTCTTCCTTAGCAGATGATGATGATCTGAATGGGGTCCAGCCAAAAATAAAAGGGCTAACAGATTGTGGCTCACAGGATTCAGAAACAATTAGTTCTACAGCAATAGGCTTTGATGAGAGAATGTTATTACATGCAGAAGTTGAAAAGAAACCAAGTCTTCATCCTGAAAGGCCAGATCGTCTTCGAGCCATTGCTGCTAGTCTTGCTAGAGCTGGTATATTTCCAGGAAGATGCTTTCCAATTCCTGCTAGAGAAATAACTCGAGAAGAACTTGTTATGGTTCATTCTTTGGAGCAAATTAATTCTGTGGAAGTTACAAGCCAGGCATTTTCTAGCTATTTCACTGCAGACACATATGCCAATGAGCATTCCGCCCTTGCTGCTAGGTTGGCTGCTGGGTTGTGTGCTGATCTGGCATCAGCAATTGTTTCTGGCCATGCCAAAAACGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAGCACATGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTAGCAGCATTGGCAGCTCAGGCAGCAGGGGCTAGGAAGGTGCTAATTTTAGACTGGGACGTTCATCATGGAAACGGTACACAGGAAATTTTTAATAGAAACAAATCGGTCTTGTATATATCATTGCATAGACACGAGAGAGGTTTGTTTTATCCTGGTACTGGAGCTGCTGATGAGGTTGGTAGTAGGGGTGCTGAAGGATTTTGTGTAAATATTCCATGGAGTCGAGGAGGAGTTGGTGATAATGATTATATTTTTGCATTTCAGAATGTTGTCCTTCCTATAGCTTCTGAGTTTGCTCCAGATTTCACCATAATATCCGCAGGTTTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGCGATGTTACTCCGTCAGGCTATGCACAGATGACACATATGTTGAACACCCTTTCTGGTGGAAAAATGCTTGTTATTCTCGAAGGCGGCTACAATCTTCGTTCCATATCTTCATCTGCCACTGCAGTAATCAAGGTATTGCTGGGTGATAATCCTGAATGTGAACCGGAAAACAGCGTTCCTTCTGCAGCCGGCCTGCAAACTGTCATGAATGTCCTCAAAATTCAGAAGAATTATTGGCCATCCTTGGGACCCATCTTTACTGATGTGCAGTCACAATGGAGAATTGAGTATCGCAGACTAAAGAGAAAACGTGTCAAGAAGCAGCGCAGAGTCCTGGCTCCTATGTGGTGGCAGTGGGGTAGAAAAAGTTTGTTGTTCCATTTCTTGAATGGCCACCTTAGTGTAAAATCAAAATGA 1728 0.445 MGTGAIGGSRFTNGEAENSVHKQAEQAPIERFVGRSQDLLSDGSNAVTVDPGEQSRPPVAPAKSHQKDLTFQDMYLNQYAFDDEDDDDSDWEPFQLPVSRVEVIKWFCKNCTMANLDGVVLCDICGEHKDSKIVNFGFFASSLADDDDLNGVQPKIKGLTDCGSQDSETISSTAIGFDERMLLHAEVEKKPSLHPERPDRLRAIAASLARAGIFPGRCFPIPAREITREELVMVHSLEQINSVEVTSQAFSSYFTADTYANEHSALAARLAAGLCADLASAIVSGHAKNGFALVRPPGHHAGVAHAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFNRNKSVLYISLHRHERGLFYPGTGAADEVGSRGAEGFCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPSGYAQMTHMLNTLSGGKMLVILEGGYNLRSISSSATAVIKVLLGDNPECEPENSVPSAAGLQTVMNVLKIQKNYWPSLGPIFTDVQSQWRIEYRRLKRKRVKKQRRVLAPMWWQWGRKSLLFHFLNGHLSVKSK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03105 575 MobiDBLite consensus disorder prediction 41 65 - -
Adu01g03105 575 ProSitePatterns Zinc finger RanBP2-type signature. 106 125 IPR001876 -
Adu01g03105 575 PRINTS Histone deacetylase superfamily signature 296 319 IPR000286 -
Adu01g03105 575 PRINTS Histone deacetylase superfamily signature 329 344 IPR000286 -
Adu01g03105 575 PRINTS Histone deacetylase superfamily signature 417 427 IPR000286 -
Adu01g03105 575 Gene3D Histone deacetylase domain 170 522 IPR037138 -
Adu01g03105 575 SUPERFAMILY Arginase/deacetylase 172 519 IPR023696 -
Adu01g03105 575 Pfam Histone deacetylase domain 194 482 IPR023801 -
Adu01g03105 575 MobiDBLite consensus disorder prediction 1 28 - -
Adu01g03105 575 PANTHER HISTONE DEACETYLASE 48 574 - -
Adu01g03105 575 PANTHER HISTONE DEACETYLASE-RELATED 48 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03105 Adu-Chr1 102545035 102553059 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03105 - - adu:107469358 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03105 01 102545035 102553059 Adu01g03105 01 102545035 102553059 ECH