Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02817 ATGGTGTTTCCTGACGAAAATTCCAGATGGAATTTGGGCCCCAAAAAAGATGCTTTGCTTAATTGCATTGCCTACAGGAATTTGGCGTTCACCGCCAAATGGAACATGAGTCAGAACTCAGATAATGTGGTCGTGTCGTGTGCATCAGGAAGGTGTGTCACTCACTCTTTGCTACTGAAACTACCTCTTCTTGTCTTCGAATCTCCTTTTCTTCTCTCGTTGAACATGGGCAACAAGGCGAATGCGGTTGTGTTATGGTTGTTTGTGTCATCCCTGTTGCTATCTGTGGTGTTGAGTGCGCCAAATGATGGTTTACGAAGGATTGGACTGAAAAAGGTTAAACCTGACCTCAATAATCGGCTTGCCGCTCGATTGGGGTCCAATGACGAGGCTTTACGTGCTTCTATTAGAAAGCACCATCTCCAAAACAATCTCGGTGGTGATGATGAAACTGACATTGTTGGTTTAAAGAACTACTTGGATGCTCAGTACTATGGTGAAATAGGAATCGGAACTCCTCCTCAGAAATTCTCTGTCATCTTTGACACCGGCAGTGCTAATTTGTGGGTGCCTTCATCCAAGTGTACCTTCTCGATTGCGTGCTACTTCCATTCAAAGTACAAGTCTGCCAAATCGACTACCTATAAGAAGAATGGGACTGCCGTTGCAATTCAATATGGTACTGGAGCAATTTCTGGTTTCTTTAGCTATGACAATGTCAAAGTTGGCGACATAGTTGTGAAGAATCAGGAATTTATTGAAGCAAATAGAGAGCCTAGTGTGACATTTTTGGTGGCCAAGTTTGATGGAATATTGGGACTTGGGTTTCAAGAGATAGCAGTTGGGAATGCTGTTCCAGTTTGGTACAATATGCTTGATCAAGGTCTTGTTAAGGAACCGGTGTTTTCATTTTGGCTGAACCGTAACCCAGAGGAAGAGAATGGGGGCGAACTTGTTTTTGGAGGTGTTGATCCCAATCACTACAAGGGAAAGCACACTTATGTGCCTGTGTCGAGAAAAGGATATTGGGAGTTTGATATGGGAGATATACTTATTGGAGACAAAAAAACTGGAATTTGTGCTGACAGCTGTTCAGCTATTGCAGACTCGGGGACTTCTTTGTTGGCAGGTCCAACGACTGTGATTACTATGATAAATCATGCAATTGGAGCAGCAGGAGTTGTAAGCCAAGAATGCAAAGCCGTTGTTGCGCAGTATGGACAAATAATCATAGACCTGCTTGCGGCCGATGCACCTCCAAAGAAGATCTGTACCCAAATTGGATTGTGCACTTTTGATGGGACACGGGGTGTTAGGCAAAGTGTGGTGGATGAGCATCAAAGATCATCATCTGGTGGCGGTATTGCTTGTTCTGCATGCGAGATGGCAGTTGTTTGGATGCGGAGCCAGCTCAATCAGAATCAGACAAAAGATCGGATACTAAACTATGTTAACCAGCTTTGTGATAAAATGCCTAGCCCGATGGGAGAATCATCTGTTGACTGTGGGGACTTGTCTAAAATGCCTACCATTTCCTTCAGTATTGGTGGAAGAACTTTTGACCTTTCCCCAGATGAGTATATACTAAAGGTTGGCGAAGGTGTTGCGGCTCAGTGCATTAGTGGCTTCACTGCAATTGATATTCCTCCTCCACGTGGCCCTCTCTGGATCCTTGGAGATGTGTTCATGGGGCGCTATCACACTGTCTTCGATTTTGGCCAAGGGAGAGTTGGATTCGCCGAAGCAGCATAA 1752 0.4463 MVFPDENSRWNLGPKKDALLNCIAYRNLAFTAKWNMSQNSDNVVVSCASGRCVTHSLLLKLPLLVFESPFLLSLNMGNKANAVVLWLFVSSLLLSVVLSAPNDGLRRIGLKKVKPDLNNRLAARLGSNDEALRASIRKHHLQNNLGGDDETDIVGLKNYLDAQYYGEIGIGTPPQKFSVIFDTGSANLWVPSSKCTFSIACYFHSKYKSAKSTTYKKNGTAVAIQYGTGAISGFFSYDNVKVGDIVVKNQEFIEANREPSVTFLVAKFDGILGLGFQEIAVGNAVPVWYNMLDQGLVKEPVFSFWLNRNPEEENGGELVFGGVDPNHYKGKHTYVPVSRKGYWEFDMGDILIGDKKTGICADSCSAIADSGTSLLAGPTTVITMINHAIGAAGVVSQECKAVVAQYGQIIIDLLAADAPPKKICTQIGLCTFDGTRGVRQSVVDEHQRSSSGGGIACSACEMAVVWMRSQLNQNQTKDRILNYVNQLCDKMPSPMGESSVDCGDLSKMPTISFSIGGRTFDLSPDEYILKVGEGVAAQCISGFTAIDIPPPRGPLWILGDVFMGRYHTVFDFGQGRVGFAEAA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02817 583 PRINTS Pepsin (A1) aspartic protease family signature 170 190 IPR001461 GO:0004190|GO:0006508
Adu01g02817 583 PRINTS Pepsin (A1) aspartic protease family signature 316 329 IPR001461 GO:0004190|GO:0006508
Adu01g02817 583 PRINTS Pepsin (A1) aspartic protease family signature 366 377 IPR001461 GO:0004190|GO:0006508
Adu01g02817 583 PRINTS Pepsin (A1) aspartic protease family signature 556 571 IPR001461 GO:0004190|GO:0006508
Adu01g02817 583 Gene3D - 394 492 - -
Adu01g02817 583 ProSiteProfiles Saposin B type domain profile. 394 434 IPR008139 -
Adu01g02817 583 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 366 377 IPR001969 GO:0004190|GO:0006508
Adu01g02817 583 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 84 583 IPR001461 GO:0004190|GO:0006508
Adu01g02817 583 Pfam Eukaryotic aspartyl protease 163 582 IPR033121 -
Adu01g02817 583 Gene3D Acid Proteases 106 322 IPR021109 -
Adu01g02817 583 SUPERFAMILY Acid proteases 85 582 IPR021109 -
Adu01g02817 583 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 179 190 IPR001969 GO:0004190|GO:0006508
Adu01g02817 583 ProSiteProfiles Saposin B type domain profile. 453 494 IPR008139 -
Adu01g02817 583 Pfam Saposin-like type B, region 2 397 430 IPR008138 -
Adu01g02817 583 PANTHER ASPARTIC PROTEINASE-LIKE 84 583 - -
Adu01g02817 583 Pfam Saposin-like type B, region 1 456 492 IPR007856 GO:0006629
Adu01g02817 583 SUPERFAMILY Saposin 395 492 IPR011001 -
Adu01g02817 583 Gene3D Acid Proteases 323 583 IPR021109 -
Adu01g02817 583 CDD phytepsin 154 581 IPR033869 GO:0004190
Adu01g02817 583 ProSiteProfiles Peptidase family A1 domain profile. 164 580 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02817 Adu-Chr1 98311060 98315927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02817 K08245 - gmx:100779619 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02817 01 98311060 98315927 Adu01g02817 01 98311060 98315927 ECH
Adu04g00409 04 4811300 4815002 Adu01g02817 01 98311060 98315927 ECH