Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02552 ATGAAAGGAAGAGAGCAGATCTTCAATGTCTTCGATATTGTTTCGGAAGTCCCCGATGACCATTTCTTTGGCTCACCATCAGAAGAAGCTAGCAGTTACAGCACCGCCAACAGCAATCTCTCCAAGCGCGCCATGAAAGAGTGGAAGATCTTGGAACAGAACCTTCCAGACTCCATCTACGTCCGGGTCTACGAGAACCGCATTGACCTAATGAGGGCGGTGATTATAGGCGCCGCGGGAACGCCGTACCACGATGGTCTCTTCTTCTTCGACATCCAGCTCCCTTCTAAATACCCAAACTATCCTCCGGAAGTATACTTCCACTCGTTCGGGCACGATCTCAACCCGAACCTCTACAACAACGGCAGGGTCTGCTTGAGCCTCCTTAACACGTGGCAGGGCAGGTCAGCCGAGAAGTGGGATCCACGCGCTTCGACGCTCCTTCAGGTCTTGCTCTCAATCCAAGCACTCGTTCTCAACGAGCAACCGTTTTTCAATGAGCCTGGGACTTCGTTCGGACGCCTTATCTTTCAGAGCAGGTCACGTGTCTACACCGAGATGGCGTTTCAGCTCACGTGGGAAGTTGCCATGAACCTCGTTCATAGGCCGCCCGAGCACTTTGAGGCCTTCGTCCTTCAACACTTCTGCACGCGCTCCGTGGCTGTCTTGGACGCGTGCCGCGAATACGCCAATGAGCGCGTGTGGGTCGGGTATTATTGCATGAACCAAGGTGGTGATGGTAGGTCATCCAGTTTGTGTTCTTCTTCAAATGTGAAAGTTTCGGCATCTTTTAAGAAGAGTTTGGTGGAAAGTTTGTACCCTAGGCTGGTTCAAACGTTTCAATCATGCGGTGCGGATTTGAATGGTACCCCAAAAGAGTTGGAATCAGAAGTTATTATTAACAAGCAACCCAAAAGGAAGCAAATGATTGATCCGACGATGCATGAAAACAAGGGTGAGGCTGGGAAGCATAACAATAAGGGTGGGATCTTCATGAAAGCTGTGGATAGGATCAAAACGGCGTTGGGATGGAAGAAGAAGAAGACAGACTCCAAACAATTCTAG 1065 0.5014 MKGREQIFNVFDIVSEVPDDHFFGSPSEEASSYSTANSNLSKRAMKEWKILEQNLPDSIYVRVYENRIDLMRAVIIGAAGTPYHDGLFFFDIQLPSKYPNYPPEVYFHSFGHDLNPNLYNNGRVCLSLLNTWQGRSAEKWDPRASTLLQVLLSIQALVLNEQPFFNEPGTSFGRLIFQSRSRVYTEMAFQLTWEVAMNLVHRPPEHFEAFVLQHFCTRSVAVLDACREYANERVWVGYYCMNQGGDGRSSSLCSSSNVKVSASFKKSLVESLYPRLVQTFQSCGADLNGTPKELESEVIINKQPKRKQMIDPTMHENKGEAGKHNNKGGIFMKAVDRIKTALGWKKKKTDSKQF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02552 354 CDD UBCc 41 192 IPR000608 -
Adu01g02552 354 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 5 307 - -
Adu01g02552 354 SMART ubc_7 42 197 - -
Adu01g02552 354 SUPERFAMILY UBC-like 29 205 IPR016135 -
Adu01g02552 354 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 39 197 IPR000608 -
Adu01g02552 354 Pfam Ubiquitin-conjugating enzyme 43 163 IPR000608 -
Adu01g02552 354 Gene3D Ubiquitin Conjugating Enzyme 2 268 IPR016135 -
Adu01g02552 354 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 5 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02552 Adu-Chr1 94840058 94841122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02552 4 286 Miscellaneous Gene Families AT2G33770 45.804 3.65e-70 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02552 K10581 - gmx:100810844 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02552 01 94840058 94841122 Adu01g02552 01 94840058 94841122 ECH