Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02126 ATGCCACCAGCTATGGTGCTTTCGCCATTGCCGGAATCCCCGTCGGTGCTGTCAGTTCCGGAATCCCCATCGGAGACTCGTCGATTCGGAGATATCAGAGGTTTGCAGTGGCGTATCAGTCTCGGGGTTTTGCCTTCTTCGAATTCCATTGATGATCTTCGTCGTGCCACCGCTAATTCTAGAAGGAGATATGCCAATTTGAGAGGTCGCCTCCTGGTTGATCCCCATCTTCCAAAAGATGGAGGTAGTCCACCCAATCTTATCATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCTGAGCTGGAGAGGATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGGGGCTACTTCCAGACACCAGGATTCCAAGGCTTATTGAGACGGATTTTATTGCTATGGTGTCTCAAACACCCAGAGTGTGGTTATAGACAAGGAATGCATGAGTTACTTGCCCCGCTGCTATATGTTCTCCAAGTTGATGTGGAACATCTTTCCGCAATACGAAAGCTTTATGAAGATCACTTCACAGACAGATTTGATGGCCTTTTCTGTCAGGAGAATGATCATCGTTACAGCTTTGATATGAGAAAATCTACAGACTCAGAGGATGATATTGGTTCCTGTGGAGATGCATTGAAAATCCAGAGTCTCGATGAGCTTGACCCTAATATACGAGCGCTTGTATTGCTAGGTGATGCTTATGGGGCTGAAGGTGAACTTGGTGTTGTTTTGTCCGATAAATTCATGGAACACGATGCTTACTGCATGTTTGAGGCATTAATGAGTGGTGCTCATGGTTCAGTTGCAATGGCTGATTTCTTCTCTTATTCACCTGTGGCTGGGTCCAATACTGGCTTGCCTCCTGTAATTGAAGCTTCAAATGCATTGTATCATTTGTTGTATCACGTTGATTCATCTCTACACAGTCATCTTGTTGATCTTGGGGTTGAACCCCAGTACTTTGCTCTTCGCTGGTTCCGAGTTTTATTTGGACGGGAATTTTCACTCGACAACCTCTTGATCATCTGGGATGAGATATTTTTATCAGATAATAGTAAAAAGCAGAAGCTTGCTGAGGACACTACAGAATCTGGTTTTATGATATTACAATCACCTCGTGGAGCCTTTATCACGGCTATGGCTGTAGCAATGTTACTTCGATTAAGATCTTCACTACTGGCAACTGAAAATCCCACAATCTGTCTTCAGAGGTTATTAAACTTCCCCGGGGACACAGATATTGATAAACTACTAGCAAAGGCTAAATCCTTGCAGGATATTGCATTAAGTACTGAAATTTCATCATCAATACCTTCATTTGTGTGGTTTCATAACCAAGCAAAATCAATTAGTCAAAGATCTACGACTCATGCATCTGACTCAGATTCTCCGAGAACTCCTCTGAAACTGTTGACTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCCCACAGTACCGAAGAACTTAAGCAAGATGGAGCCGAAAATCAGGTTCCAGCTCAGAAAAAGAAATGGACAGAAAAGGTAAATGTCAGTTTAAAGAGAACAGAATCTGCCCCTTCTCCATCCACGACTAATGATGGTAAAAAGGAAAATAAGGAAGCTGTTAGACGCAGTTTGTTAGAAGATCTTTGTAAGGAACTTGGCTCAGAGGTAGATACAGAAAACCTGTATGTATTCGAGCAGGATAATCGTCCTGTAGTAGTTGAAAGGGAACAACAAGATGACGGCTCTGAATGCTGCAACAATTACTTTGCAGATGTTAGAGGTCTAAGTGTAAGTACTAGAAGTGAGGGAAATTCACCTATATTTTCTGGCCTAGCTAGTCCTCGTTTGGATGTCAATCGTCGAAACTATTCTGAGAAAAGTAGCATTCCGTATAATTATAATTTGTCCTTTCTTGAAACTGAAATCAATGAAACTGGTTCACCTCTTCCAGTCTCTGATTGTCCTGAGAACTTATCTCACACATCCTCCTTCAACAATGATCCTTTGGGAAATTCAGCCTCACATCCTAAGTGGGGAAAGCTGAATAAATTCCAGTGGTTTTTTTCAAGGCTTGGACGAAACAGTGATGAACGTACATCTGTCGAGGGTGGAAGTCCTTCTCAAGATGCAAAACCTGCCAAATGCGAAAATCAAAGTCATGTAATGATACCCTCTTCTTCTATAGCAAATGGGCATTGTAGTCCTGTTAGAAGCCAAGGGGATTCTCCGATAGACCAGAATATGGTAGGAACTATTAGGAATATTGGGCAGTCTATGCTTGAGCATATTCAGGTGATTGAGTCTTCTTTCCAACAAGAACAGGGAGCTTCGAAAGATGTTGTGGTTGGTAAAGGGCAGCTTGCTGCCATGACAGCAGCTCTGGATGAACTTCGAAAAATTAGTAATCTTTTGTCTGAGATGTGA 2448 0.4248 MPPAMVLSPLPESPSVLSVPESPSETRRFGDIRGLQWRISLGVLPSSNSIDDLRRATANSRRRYANLRGRLLVDPHLPKDGGSPPNLIMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGGYFQTPGFQGLLRRILLLWCLKHPECGYRQGMHELLAPLLYVLQVDVEHLSAIRKLYEDHFTDRFDGLFCQENDHRYSFDMRKSTDSEDDIGSCGDALKIQSLDELDPNIRALVLLGDAYGAEGELGVVLSDKFMEHDAYCMFEALMSGAHGSVAMADFFSYSPVAGSNTGLPPVIEASNALYHLLYHVDSSLHSHLVDLGVEPQYFALRWFRVLFGREFSLDNLLIIWDEIFLSDNSKKQKLAEDTTESGFMILQSPRGAFITAMAVAMLLRLRSSLLATENPTICLQRLLNFPGDTDIDKLLAKAKSLQDIALSTEISSSIPSFVWFHNQAKSISQRSTTHASDSDSPRTPLKLLTDSYWEEKWRVAHSTEELKQDGAENQVPAQKKKWTEKVNVSLKRTESAPSPSTTNDGKKENKEAVRRSLLEDLCKELGSEVDTENLYVFEQDNRPVVVEREQQDDGSECCNNYFADVRGLSVSTRSEGNSPIFSGLASPRLDVNRRNYSEKSSIPYNYNLSFLETEINETGSPLPVSDCPENLSHTSSFNNDPLGNSASHPKWGKLNKFQWFFSRLGRNSDERTSVEGGSPSQDAKPAKCENQSHVMIPSSSIANGHCSPVRSQGDSPIDQNMVGTIRNIGQSMLEHIQVIESSFQQEQGASKDVVVGKGQLAAMTAALDELRKISNLLSEM 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02126 815 MobiDBLite consensus disorder prediction 499 545 - -
Adu01g02126 815 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 31 322 IPR035969 -
Adu01g02126 815 SMART tbc_4 24 408 IPR000195 -
Adu01g02126 815 MobiDBLite consensus disorder prediction 1 25 - -
Adu01g02126 815 Pfam Rab-GTPase-TBC domain 111 191 IPR000195 -
Adu01g02126 815 Pfam Rab-GTPase-TBC domain 259 363 IPR000195 -
Adu01g02126 815 MobiDBLite consensus disorder prediction 703 723 - -
Adu01g02126 815 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 14 730 - -
Adu01g02126 815 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 297 437 IPR035969 -
Adu01g02126 815 Coils Coil 798 815 - -
Adu01g02126 815 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 95 279 - -
Adu01g02126 815 MobiDBLite consensus disorder prediction 524 538 - -
Adu01g02126 815 Gene3D - 301 445 - -
Adu01g02126 815 ProSiteProfiles TBC/rab GAP domain profile. 27 362 IPR000195 -
Adu01g02126 815 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 14 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02126 Adu-Chr1 88534155 88538915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02126 K18469 - gmx:100816501 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02126 01 88534155 88538915 Adu01g02126 01 88534155 88538915 ECH
Adu01g02126 01 88534155 88538915 Adu04g01259 04 29061823 29066262 PCT