Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02100 ATGTTGTACGTGCAACAGCAGCCGATGATTAAGAAGGCGGAGAGGAGCGGCGGCGGCAGCAGCAGCTGGAGCAGAGGCATAGAGGAAGAGAGGCTTGAGATTGTGGACCTCAGTGGCATGTCTTTGGACTCCCTTCCCAACCCTTCTCTTAACTTGGCCATCATTTGCAAGTTGGACCTCTCTAACAACAATCTACAGAATATTCCGGAGTCATTGACAGCAAGATTGGTGAATTTGGTGGTGCTGGATGTGCACTCGAACCAGCTTAGAAGGCTGCCAAACTCCATTGGCTGCCTGTGTAAACTGAAGGTCTTGAATGTGGCTGGAAACATGATCCAATACCTTCCAAAAACCATTGACAATTGCAAATCATTGGAGGAACTAAACGCCAACTTCAACAAACTGATACAGCTTCCAGAAAATATTGGTTTGGAACTCAGAAAGCTGAAGAAGTTATCAGTAAACTCCAATAAACTACTCTTCCTTCCACGCTCCACCTCAAACCTCACCTCTCTCAAGCTCCTGGACGCCCGCCTCAACTGCCTCCGCTCTCTCCCCGAAGACCTCGAAAAACTCGTCAGCCTTGAAACCCTCAACATCAGCCAGAACTTTCACTTCCTCCGTTCTCTCCCTTGCTCCCTCGGTCTTATCTTCTCCCTCGTCGAACTCGACATCAGCTACAACAGAATCACCTCCTTGCCTCCTTCCATTGCCTGTCTCAACAAGCTCCAGAAGCTTTGTGTCGATGGTAATCCGCTCATGTCGCCGCCACTAGAAGTGGTGGAACAAGGCTTATATGCCGTGAAGGGGTACCTCTATCAGAAGATGAACTCTCCGTCGTCGTCGTCGGAGAGCCCATCAACGAAGAAGAAGTCATGGGTTGGAAAGTTGGTGAAGTACAAAACGTTCAGTAATGGAGGAGAAACGAAGAGGAGCAGCAGCCATGAAGAACGCGAAGCTTTCGTAATGCCGGATTATAAGCCCATTGATACTCTTGCTTCACCGCGTTACATGGGAATCTTCTCACCTCGCCGCCTCTTCTCGCCTCGTAATTACTTCACCAACTACTCATGA 1074 0.4907 MLYVQQQPMIKKAERSGGGSSSWSRGIEEERLEIVDLSGMSLDSLPNPSLNLAIICKLDLSNNNLQNIPESLTARLVNLVVLDVHSNQLRRLPNSIGCLCKLKVLNVAGNMIQYLPKTIDNCKSLEELNANFNKLIQLPENIGLELRKLKKLSVNSNKLLFLPRSTSNLTSLKLLDARLNCLRSLPEDLEKLVSLETLNISQNFHFLRSLPCSLGLIFSLVELDISYNRITSLPPSIACLNKLQKLCVDGNPLMSPPLEVVEQGLYAVKGYLYQKMNSPSSSSESPSTKKKSWVGKLVKYKTFSNGGETKRSSSHEEREAFVMPDYKPIDTLASPRYMGIFSPRRLFSPRNYFTNYS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02100 357 MobiDBLite consensus disorder prediction 1 24 - -
Adu01g02100 357 PANTHER LEUCINE-RICH REPEAT-CONTAINING 22 349 - -
Adu01g02100 357 SMART LRR_bac_2 219 236 - -
Adu01g02100 357 SMART LRR_bac_2 52 71 - -
Adu01g02100 357 SMART LRR_bac_2 192 213 - -
Adu01g02100 357 SMART LRR_bac_2 76 95 - -
Adu01g02100 357 SMART LRR_bac_2 99 118 - -
Adu01g02100 357 SMART LRR_bac_2 169 188 - -
Adu01g02100 357 SMART LRR_bac_2 122 141 - -
Adu01g02100 357 SMART LRR_bac_2 146 165 - -
Adu01g02100 357 ProSiteProfiles Leucine-rich repeat profile. 78 99 IPR001611 GO:0005515
Adu01g02100 357 Pfam Leucine rich repeat 57 112 IPR001611 GO:0005515
Adu01g02100 357 Pfam Leucine rich repeat 147 203 IPR001611 GO:0005515
Adu01g02100 357 Gene3D Ribonuclease Inhibitor 3 140 IPR032675 -
Adu01g02100 357 Gene3D Ribonuclease Inhibitor 141 272 IPR032675 -
Adu01g02100 357 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 22 349 - -
Adu01g02100 357 SMART LRR_typ_2 123 145 IPR003591 -
Adu01g02100 357 SMART LRR_typ_2 217 240 IPR003591 -
Adu01g02100 357 SMART LRR_typ_2 146 168 IPR003591 -
Adu01g02100 357 SMART LRR_typ_2 52 75 IPR003591 -
Adu01g02100 357 SMART LRR_typ_2 169 192 IPR003591 -
Adu01g02100 357 SMART LRR_typ_2 76 98 IPR003591 -
Adu01g02100 357 SMART LRR_typ_2 99 122 IPR003591 -
Adu01g02100 357 SUPERFAMILY L domain-like 27 258 - -
Adu01g02100 357 ProSiteProfiles Leucine-rich repeat profile. 219 240 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02100 Adu-Chr1 88167563 88169127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02100 53 246 Receptor kinase-like Gene Family AT4G13920 33.498 1.04e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02100 - - gmx:100783239 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02100 01 88167563 88169127 Adu01g02100 01 88167563 88169127 ECH
Adu01g02100 01 88167563 88169127 Adu03g02018 03 37888281 37892448 PCT