Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02002 ATGATTCCCAATAACAACCATAGTACCCCTAAACCCATTCCTCATCCTTCTTCTTCCTCTAATTCTTCATCAACACCTCAATTTCAGCTTCCATTGTTTTCCCAACCCATGGCTGGGGTTACTCCTATCCCTAACCCCAACCCCAACCCCAACCCTTATCCCCAACAACCACCTCAGCATCATCCAATTCTCAATCCAATACCCGATTTCCCCCAATTCTCAAACCCCGAAGAACCTAGGGATTTCGGGGTTCCTTACGCCACCACTTCCGTTCAAACCCATCCCTGGGTTGACCAAGAAACCAACTTTCAGCCATTTTCAACTGATTTTGGGGTTTCCGATCAAGACATTGACATTGGCTCAATTATTGCCAATTTTCTCAACCCCTCTAACTCCGACTTATTTGGTGGTCCCGATCATGGGGCATCATGCAATGGCGTTGCTGATGAAACAGAAAGAGGCTTTCTCAAGAGAGGAACAGTTGATTATATGGGGGTTACCGTTCCCATTGACGTCGATAATGCCACTCCCAAGCGCACTAAGACAATGGGAGAAGTATGGAACGAGAACCCTGATTTTCAGTTTGATTTTTCTCAAGGTTTCTTTTCGCCGGTGGTGGAGGTGGAGGAAGTGCAAGGTGATCCGAGAGGGAAGAGGAAATTGGATGGTCATGGTGCTGATACCAGTGGTGCCGCTGAAAGGTTGGTTCTTGGTGGTGACAACGGTGGTGGTGGTAATTCCGGTGGTCTCAGGAGGTTAAGCAGAGAAGAGAAAATGAAGGGGCCGGTGATGGAAATTGATTTCTTGGCAAATGCTTTTCATGACGAGGCATTCGGCGCACCTAGACCTGAAAATTCGAACCCTGGTGTTCCGATTGAAATTTCAGATGATGATGATGATGATGATGATGATGGCGGGGTTATAATCCGCCAGCCACCACAGGATTTTGTTAGCTCAAGGAGAAGGGAACGTTTCAGGGACATAGCCAAAGAAAATGCATCTCGGTTTGCCCGGTTCGTGCCGGATGCTAAGGATGAATCATCTAACCCTGAGCCTCCAATTGATGAGGGGCCAACACCTTTTTCGACAGCTTTGAAATTTATCAGAGAGAAAGGGATGAAAAATGTGCAAAATAAATCATGGGTTCCTAAATGGAATCATACAAGACCTAGGATTAAGGTGCCATCATTGAAAGAAATATGCCTAAAAGTTCTTGCCAGCTATGCTGATGCAATTGTGTCACTTGATGGTGTCCCAGAAGACCTGAGGCACAGACTTAGCCAGCTGACCTGTGACTCTCATCGGATGGACTCTCACTTTTTTGAACTTGTTGTTAAAGGGTCTCCCACTGAGATTCGCCTGAGAGATTGCTCATGGATGTCTGAGGATCAATTGACAGAATCTCTCAAAGCGTGTGACACTTCCAAATTGGAGGTGCTACAACTTGACCAATGTGGACGTTGTATACCTGATTATATTGTGACAAAGTCACCGAGGTGGTTACACTTACCTAGATTAATCAGTCTGTCCATCACTGGTGCTTGCCGTCTATCAGATAAGGGGTTGCGAGCACTGATTTCTTCTGCCCCGGCTCTTAGATCGGTAAACCTAAGCCAGTGCTCCCTTCTCACATCTGCCAGTATTAATATTTTGGCTGATTCACTAGGACCACTTCTGAAAGAGTTGTATCTTGATCATTGCCAAAACATCGATACTGCATTAATTGTGCCAGCACTGAAGGCACTTGAAAATTTAGAAGTGCTGTCATTGGCAGGCGTGGGAACTGTTTGTGATAAATTTATCAAGGATTACATCATTGCCAATGGTCAAAACATGAAGGAGCTTATTTTAAAGGATTGTGTAAAGTTGACTGATGTGTCGATTAAAGTCATTGCTGAACACTGTCCTCTGTTGTGTGTCCTTGATCTCGAGAACTTGCCTAATTTGACAGATTTATCTATAGGATATCTTGCCAATAATTGTCGAGCACTTAACACATTGAAGCTCCCCTGTACACCATTCAGCGATGAAGCAATAGCTGCCTTCATAGAGATCATTGGAGAGTCCTTGAAAGAACTTTCACTCAATAAAATCAAGAAGGTTGGTCAGCATACAGCCGTGTCACTTGCAAGCCATGCGAAAAATCTGCAAGTTCTAGATCTATCTTTTTGCCGAAATTTGACAGACACCGACTTGGGTTTGATTGTGGATAGCTGCTTCTCGCTAAAGTTTCTTATACTTTTTGGATGTACACAGGTTACAGATGTTTTTCTGAAAGGATATTCAAACCCAGAGACCCAGATCATTGGATTGCAGATGTCTCCTTTATTGCAACATGTCAAAGTGCCTGATTATCATCAAGGTGCTTTGCGTTATTCACCGGTACCTGTAAATTCGCCATAA 2403 0.4424 MIPNNNHSTPKPIPHPSSSSNSSSTPQFQLPLFSQPMAGVTPIPNPNPNPNPYPQQPPQHHPILNPIPDFPQFSNPEEPRDFGVPYATTSVQTHPWVDQETNFQPFSTDFGVSDQDIDIGSIIANFLNPSNSDLFGGPDHGASCNGVADETERGFLKRGTVDYMGVTVPIDVDNATPKRTKTMGEVWNENPDFQFDFSQGFFSPVVEVEEVQGDPRGKRKLDGHGADTSGAAERLVLGGDNGGGGNSGGLRRLSREEKMKGPVMEIDFLANAFHDEAFGAPRPENSNPGVPIEISDDDDDDDDDGGVIIRQPPQDFVSSRRRERFRDIAKENASRFARFVPDAKDESSNPEPPIDEGPTPFSTALKFIREKGMKNVQNKSWVPKWNHTRPRIKVPSLKEICLKVLASYADAIVSLDGVPEDLRHRLSQLTCDSHRMDSHFFELVVKGSPTEIRLRDCSWMSEDQLTESLKACDTSKLEVLQLDQCGRCIPDYIVTKSPRWLHLPRLISLSITGACRLSDKGLRALISSAPALRSVNLSQCSLLTSASINILADSLGPLLKELYLDHCQNIDTALIVPALKALENLEVLSLAGVGTVCDKFIKDYIIANGQNMKELILKDCVKLTDVSIKVIAEHCPLLCVLDLENLPNLTDLSIGYLANNCRALNTLKLPCTPFSDEAIAAFIEIIGESLKELSLNKIKKVGQHTAVSLASHAKNLQVLDLSFCRNLTDTDLGLIVDSCFSLKFLILFGCTQVTDVFLKGYSNPETQIIGLQMSPLLQHVKVPDYHQGALRYSPVPVNSP 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02002 800 MobiDBLite consensus disorder prediction 41 65 - -
Adu01g02002 800 SMART LRR_CC_2 687 712 IPR006553 -
Adu01g02002 800 SMART LRR_CC_2 661 685 IPR006553 -
Adu01g02002 800 SMART LRR_CC_2 503 528 IPR006553 -
Adu01g02002 800 SMART LRR_CC_2 529 554 IPR006553 -
Adu01g02002 800 SMART LRR_CC_2 713 738 IPR006553 -
Adu01g02002 800 SMART LRR_CC_2 635 660 IPR006553 -
Adu01g02002 800 SMART LRR_CC_2 609 634 IPR006553 -
Adu01g02002 800 PANTHER UNCHARACTERIZED 284 793 - -
Adu01g02002 800 MobiDBLite consensus disorder prediction 336 351 - -
Adu01g02002 800 Gene3D Ribonuclease Inhibitor 605 686 IPR032675 -
Adu01g02002 800 MobiDBLite consensus disorder prediction 277 321 - -
Adu01g02002 800 MobiDBLite consensus disorder prediction 1 68 - -
Adu01g02002 800 MobiDBLite consensus disorder prediction 336 360 - -
Adu01g02002 800 Gene3D Ribonuclease Inhibitor 687 782 IPR032675 -
Adu01g02002 800 PANTHER F-BOX/LRR PROTEIN 284 793 - -
Adu01g02002 800 SUPERFAMILY RNI-like 450 756 - -
Adu01g02002 800 MobiDBLite consensus disorder prediction 1 34 - -
Adu01g02002 800 Gene3D Ribonuclease Inhibitor 413 604 IPR032675 -
Adu01g02002 800 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02002 Adu-Chr1 87033242 87037544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02002 K15082 - gmx:100798274 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02002 01 87033242 87037544 Adu01g02002 01 87033242 87037544 ECH
Adu01g02002 01 87033242 87037544 Adu03g02242 03 46408519 46412499 PCT