Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01920 ATGTCATCCCACATCGTCTGGTACCTTTACAGCCACCTCATCAGCCACAAGATCCCTCTCATCATCCACAACATCCTTAGAACCTACGACCTAGTAGATCTCAGCGACAGGCACAACCTCTACCATGTGGCATCGGATCTCGACTGCATTACCCGGGTGATCACCATTGATGATATCATTATTACTGTTTCTCGAAACACTTTCAAACCAAGTCCGCGCAACACAAAACCAAACAAAGCAAATAATCAAACACCTTCCGTGCATCCAAAACCTGGTCACATTTCCATTCCCATGTTTCACCGCGATCACTCCCCATGCCTCTTCCTCCTCCTCCTTCTACTCTCCACTTTCTGCATCTCCCACTCACAACAATCCACTTGGGCTTCCAAGAAAATGCGCATGAGAGAGAAAGTTCGCACCATGTTTTACCATGCCTATGACAACTATATGACTTATGCATTTCCGCATGATGAGCTAAAGCCACTCTCCAAAACGTACACTGACTCCTTAAGTGAGCTAGGAAATTTGAAGCTTGAACATTTACCTCAAGACTACAATGGATCTGCCCTTACACTTATCGAATCGCTGTCAAGCCTTGTTATTATGGGAAACAATACTGAATTTGAGAAGGCAGTGCTCTGGCTTTCCGAAAATCTAAAATTTGACGTTGACGCACGCATAAATCTTTTTGAGTGCAACATAAGAGTTCTAGGAGGACTTGTCTCTGCTCATTTACTTGCATCTGATTCTTCAAAGAAGTTGTTTCAAGGGACTTACAATAATCAGCTCCTATTTCTGGCTGAAGATTTAGGGAAACGCTTTCTACCGGCATTCGATACGCCCACTGGATTGCCATATGCGTGGATTAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCAGGATGTGGTTCACTGATTCTTGAAATGGGTGCTTTATCAAAAGTGACCGGTGACCCTAGGTATGAATCTGCAGCTTTGCGAGCCCTTCGTAAGCTATGGAGCATGCAGAGTTCATTACGTTTATTTGGAACCACATTAGATGTGGAAACTGGGGAATGGATTGAATTTTCATCAGGTATTGGAGCAGGGGTTGATTCCTTTTATGAGTATCTACTTAAAGCTCATATCCTATTCGGGAAGGAGGACTTTTGGAGAATGTTTAATTCTGCTTATGTTGCTGTGCAGAAATATTTCAGACATGGTCCTTGGTATCATGAAGCTGATATGAGAACAGGAAAAGCAACTTACTGGCAGCTTACAAGTCTTCAAGCATTTTGGCCTGGTCTACAGGTTCTTATTGGGGATATCACAGCCGCCAATTCATCTCACCGTGAGTTCTTCCATGTGTGGAAGAGATTTGGTGTGCTACCTGAGCGGTATTTGCTGGACCACCGGATGATTCACCCTACTGAAAAATATTATCCGTTACGTCCTGAACTCGCCGAGTCAACATTCTATTTATATCAAGCAACTAAAGATCCATGGTATATTGAAGTGGGTGAAACAATAGTTAATTCCCTTAATCTATACACCAAAGTAGAAGGTGGTTTTGCAAGCGTCAAGGATGTGACAACTATGCAGTTGGAAGATCATCAACATAGTTTTTTTCTTGCTGAAACGTGCAAATATTTATATCTCCTATTTGATGATTCGTTTGTACATGAGACTAACTATGTATTTACCACCGAAGGGCATCCCCTTCCTGTACTAAACGCATGGCATGAGAAGCTTCCAGAAACTTATATTCCTACTAATTGGACTTTCATGAAGAGACAACCAGCAGCGAGTCGAATCAGTTCAATGTCTTTGCAAGTTTGCCCTGCCATCACATTGAAATCAGGCCAACACATTGAGAGTGCATGCCACATCCCTGATGCGCGTAGTGATTATAGATGTTTGACTGACGAAGATTGTGGAGTCGATTCCACGACATGTACACGAAGATCTTGTAGCATGGCTGAATCAGTATACAAACCACTGAAACAACTAATGAGCACCAGTTTATGTCACAGGAGTGAGAGTTATTTGATCAGTTCAGCAACCATGATAAGGAGGAGAGAAAATAAAAACATCACTGGGAGAAGTTGGATTATGAGAATGAGTATACAGAAAGTGAATATAACATTCTTTCTACCTATTTCTCATCTTTTTTAG 2172 0.419 MSSHIVWYLYSHLISHKIPLIIHNILRTYDLVDLSDRHNLYHVASDLDCITRVITIDDIIITVSRNTFKPSPRNTKPNKANNQTPSVHPKPGHISIPMFHRDHSPCLFLLLLLLSTFCISHSQQSTWASKKMRMREKVRTMFYHAYDNYMTYAFPHDELKPLSKTYTDSLSELGNLKLEHLPQDYNGSALTLIESLSSLVIMGNNTEFEKAVLWLSENLKFDVDARINLFECNIRVLGGLVSAHLLASDSSKKLFQGTYNNQLLFLAEDLGKRFLPAFDTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKVTGDPRYESAALRALRKLWSMQSSLRLFGTTLDVETGEWIEFSSGIGAGVDSFYEYLLKAHILFGKEDFWRMFNSAYVAVQKYFRHGPWYHEADMRTGKATYWQLTSLQAFWPGLQVLIGDITAANSSHREFFHVWKRFGVLPERYLLDHRMIHPTEKYYPLRPELAESTFYLYQATKDPWYIEVGETIVNSLNLYTKVEGGFASVKDVTTMQLEDHQHSFFLAETCKYLYLLFDDSFVHETNYVFTTEGHPLPVLNAWHEKLPETYIPTNWTFMKRQPAASRISSMSLQVCPAITLKSGQHIESACHIPDARSDYRCLTDEDCGVDSTTCTRRSCSMAESVYKPLKQLMSTSLCHRSESYLISSATMIRRRENKNITGRSWIMRMSIQKVNITFFLPISHLF 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01920 723 PRINTS Glycosyl hydrolase family 47 signature 276 295 IPR001382 GO:0004571|GO:0005509|GO:0016020
Adu01g01920 723 PRINTS Glycosyl hydrolase family 47 signature 141 161 IPR001382 GO:0004571|GO:0005509|GO:0016020
Adu01g01920 723 PRINTS Glycosyl hydrolase family 47 signature 226 244 IPR001382 GO:0004571|GO:0005509|GO:0016020
Adu01g01920 723 PRINTS Glycosyl hydrolase family 47 signature 424 440 IPR001382 GO:0004571|GO:0005509|GO:0016020
Adu01g01920 723 PRINTS Glycosyl hydrolase family 47 signature 481 505 IPR001382 GO:0004571|GO:0005509|GO:0016020
Adu01g01920 723 PRINTS Glycosyl hydrolase family 47 signature 540 560 IPR001382 GO:0004571|GO:0005509|GO:0016020
Adu01g01920 723 PRINTS Glycosyl hydrolase family 47 signature 367 384 IPR001382 GO:0004571|GO:0005509|GO:0016020
Adu01g01920 723 PANTHER ALPHA-MANNOSIDASE I MNS5 115 660 - -
Adu01g01920 723 Gene3D - 123 586 IPR012341 GO:0005975
Adu01g01920 723 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 115 660 IPR044674 GO:0004571|GO:1904380|GO:1904382
Adu01g01920 723 Pfam Glycosyl hydrolase family 47 141 574 IPR001382 GO:0004571|GO:0005509|GO:0016020
Adu01g01920 723 SUPERFAMILY Seven-hairpin glycosidases 132 588 IPR036026 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01920 Adu-Chr1 83618633 83627492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01920 103 657 Glycoside Hydrolase AT1G27520 76.882 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01920 K10084 - gmx:100793674 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01920 01 83618633 83627492 Adu01g01920 01 83618633 83627492 ECH