Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01902 ATGGCTTCAACTGCTTCTAGGTTCATCAAGTGTGTCACAGTTGGTGATGGAGCATTCCTTTTCGCTGCCACTTTTTTTGTGGATTATATTCCCACAGTGTTTGATAATTTCAGTGCAAATGTGGTAGTTGAAGGCACAACTGTCAATTTAGGCCTTTGGGACACTGCTGGGCAAGAGGACTACAATAGATTGAGGCCTCTGAGCTACAGAGGCGCAGATGTATTTGTATTGGCTTTCTCTCTTGTTAGTGGCGCGAGCTATGAGAATGTCTTGAAGAAGTGGATCCCGGAGCTGCAGCATTTTGCCCCTGGTGTTCCAGTGGTACTAGTTGGCACCAAATTAGATCTTCGCGAAGACAAGCACTATCTAGCGGATCATCCCAGTCTGGTGCCTGTGACTCGTGAGCAGGGGGAGGAACTACGGAAACGAATAGGAGCTAGCTATTATATTGAGTGCAGCTCAAAAACTCAGCAGAATGTGAAGGCGGTTTTCGATGCGGCAATCAAGGTGGTGATCAAGCCTCCACAGAAGCAACAAGAGAAGAAGAAGAAACCGCGTCCCGGGTGTCTATTAAATATCTTCTGTGGAAGGAATATTGTTGGTCTTAAATGA 612 0.4624 MASTASRFIKCVTVGDGAFLFAATFFVDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSGASYENVLKKWIPELQHFAPGVPVVLVGTKLDLREDKHYLADHPSLVPVTREQGEELRKRIGASYYIECSSKTQQNVKAVFDAAIKVVIKPPQKQQEKKKKPRPGCLLNIFCGRNIVGLK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01902 203 Pfam Ras family 23 171 IPR001806 GO:0003924|GO:0005525
Adu01g01902 203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 171 IPR027417 -
Adu01g01902 203 Gene3D - 2 191 IPR027417 -
Adu01g01902 203 ProSiteProfiles small GTPase Ras family profile. 1 191 IPR001806 GO:0003924|GO:0005525
Adu01g01902 203 ProSiteProfiles small GTPase Rho family profile. 1 171 - -
Adu01g01902 203 ProSiteProfiles small GTPase Rab1 family profile. 1 203 - -
Adu01g01902 203 SMART rho_sub_3 11 174 IPR001806 GO:0003924|GO:0005525
Adu01g01902 203 PANTHER GTPASE, PUTATIVE-RELATED 1 196 - -
Adu01g01902 203 SMART rab_sub_5 9 174 - -
Adu01g01902 203 TIGRFAM small_GTP: small GTP-binding protein domain 24 165 IPR005225 GO:0005525
Adu01g01902 203 SMART ras_sub_4 6 174 - -
Adu01g01902 203 PANTHER RHO FAMILY GTPASE 1 196 IPR003578 GO:0005525|GO:0007264
Adu01g01902 203 CDD Rop_like 8 172 - -
Adu01g01902 203 PRINTS Transforming protein P21 ras signature 24 40 - -
Adu01g01902 203 PRINTS Transforming protein P21 ras signature 41 63 - -
Adu01g01902 203 PRINTS Transforming protein P21 ras signature 103 116 - -
Adu01g01902 203 PRINTS Transforming protein P21 ras signature 149 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01902 Adu-Chr1 82271250 82273807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01902 22 186 EF-hand Containing Proteins AT3G63150 29.586 1.55e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01902 K04392 - pvy:116135646 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01902 01 82271250 82273807 Adu01g01902 01 82271250 82273807 ECH