Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01618 ATGGAGCAATATTGGTCTGGGAATGCCGTAAATCAAAACAAAGGGATGGTGGAGAATTTGCAGCGTTATGGAATAATCCAATCAAGAAAGGTAGCTGAAGTAATGGAAACTATTGATAGAGGTTTGTTCGTACCCAATGGAACCCCACCTTATGTTGACAGCCCAATCCCAATAGGCTATAATGCCACTATATCTGCGCCGCACATGCATGCCACCTGCCTTCAATTGCTTGAGGAGAATTTACAACCCGGGATGCATGCGCTGGATGTTGGCTCTGGAACTGGGTACTTGACGGCATGCTTTGCAATGATGGTTGGACCACAAGGCCGTGCTATTGGTGTGGAGCATATTCCTGAATTGGTTTCCTCCTCAACGGAGAATATTCAGAAGAGTGCTGCTGCGTCACTACTGAAAGATGGTTCCCTTTCTGTGCATTCTGGTGATGGGAGGCAAGGTTGGCCAGAGTTTGCTCCTTACGATGCCATTCACGTTGGGGCAGCGGCCAAGGAGATTCCACAACCACTTATTGACCAGTTGAAGCCAGGAGGTAGAATGGTGATTCCTGTTGGAGTCCTATTTCAGGATTTGCAGGTTGTGGATAAGAACTCTGATGGTTCCGTCAGTATCCGGACGGAGACTTCTGTTCGTTATGTGCCTCTAACCAGTAAAGAAGCTCAACTGCAAGGTTAA 690 0.4739 MEQYWSGNAVNQNKGMVENLQRYGIIQSRKVAEVMETIDRGLFVPNGTPPYVDSPIPIGYNATISAPHMHATCLQLLEENLQPGMHALDVGSGTGYLTACFAMMVGPQGRAIGVEHIPELVSSSTENIQKSAAASLLKDGSLSVHSGDGRQGWPEFAPYDAIHVGAAAKEIPQPLIDQLKPGGRMVIPVGVLFQDLQVVDKNSDGSVSIRTETSVRYVPLTSKEAQLQG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01618 229 Gene3D Vaccinia Virus protein VP39 5 229 IPR029063 -
Adu01g01618 229 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Adu01g01618 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 6 229 IPR000682 GO:0004719|GO:0036211
Adu01g01618 229 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 11 226 IPR000682 GO:0004719|GO:0036211
Adu01g01618 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 198 IPR029063 -
Adu01g01618 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 6 229 - -
Adu01g01618 229 CDD AdoMet_MTases 88 189 - -
Adu01g01618 229 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 147 162 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01618 Adu-Chr1 50241390 50244179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01618 K00573 - gmx:100527082 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01618 01 50241390 50244179 Adu01g01618 01 50241390 50244179 ECH
Adu01g01618 01 50241390 50244179 Adu03g02125 03 41867109 41869631 PCT