Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01446 ATGTCAATGAATAATAATTCAAATGGTATAGTCTTTTCATACTCAATTAAGAGCAAACACACGCACGGAGTTCTTGCGAGTCTTCCTAATCAATCACACGAAAACAAGAGAGCGTTGGTTTTCTTTCTGTTGTTCGAACGTCTTCCAACAGGTTCAAGAAAAATGGCAAAGAGTTACTTCAAACAAGAACATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGGATTAGGGAGAAATATCCGGATCGTATCCCGGTGATTGTGGAGAAGGCGGAAAGAAGTGATATCCCAAGTATTGACAAGAAAAAGTACCTTGTCCCTGCTGATCTGACAGTTGGACAATTTGTCTATGTAATCAGAAAGAGGATCAAATTAAGTGCAGAAAAGGCAATCTTTATATTTGTGGATAATGTCCTTCCACCTACAGGAGCAATAATGTCTGCCATATATGATGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGAGAGAACACCTTTGGGGACCTAACTTCCCACTAG 531 0.3974 MSMNNNSNGIVFSYSIKSKHTHGVLASLPNQSHENKRALVFFLLFERLPTGSRKMAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLTSH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01446 176 Pfam Autophagy protein Atg8 ubiquitin like 68 171 IPR004241 -
Adu01g01446 176 Gene3D - 46 171 - -
Adu01g01446 176 SUPERFAMILY Ubiquitin-like 57 171 IPR029071 -
Adu01g01446 176 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 40 171 IPR004241 -
Adu01g01446 176 PANTHER AUTOPHAGY-RELATED PROTEIN 40 171 - -
Adu01g01446 176 CDD Ubl_ATG8 66 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01446 Adu-Chr1 37525180 37529632 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01446 K08341 - gmx:100499835 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01446 01 37525180 37529632 Adu01g01446 01 37525180 37529632 ECH