Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01225 ATGGAACGTGTCAGTGATAAAAATCGTCCACAACCACCACGTTCTCGTGAGTTTCTTGAAACAGTTGAAGAGATCACCCGAATCTACCGGTCACTGCCACCTCGACCTTCCATAGAGGAACTTGAAGCTGCCACGTCAGCCTTGGAAACCGTGAACAGCGAGGAGCAATCGAAGCTCAACGAAATCTCGGAGCAACAGCCGCCACGTGGCATCCCTGATGACCTGTTCTCTGTTCTGAAGGATCTCAAGAAGAGCGTGGTGGTTTTCCAGAGCCACCAGCAGAGGAAAGAGGCGCTTCATGTTATTGACATGGAGAAGATGTTTCAAAACTTCGGTGACCTTATTCAGAGGGCGTCTGAGTTGGTCTCCGGCGGTGGCGGCGGCGGCGACGGTGTTGGCACTGAGATTGATGAGGTTGCTGGTGAGAGGTTGGTGGTGATGAAGAAGATAGAGGAAGCGGAAGAGGAAGAGGAAGAGGAGGATGAAGGGGCACGAAAGAATGTTTTGAAGAAGAGTTCATCGGCGAAGAAGTTGTTCTCTCAAGGCACTGGAAGCTCTGAGAAATTAAGTATCATGAAAGTCGCTACTGTTATTGAAACTTGTGCTAAAAATGGAGACACAAAGCTTGAGCTTAAAGGGAAATTGGAGGAACAAATGGAATGGTTACCCCTTTCAATTGGGAAACTATCTCATGTCACTGAAATAGACCTATCCGAAAACAGAATCATGGCTCTTCCAACAACAATTGTGGCTCTCAAGGCCTTAACAAAGCTAAATCTTTCTTCCAACCAGCTCATAAACCTTCCCCAATCATTTGGCGAATTGATTAACCTTGTCGAGCTCAACCTCCGCTGCAACAAAATGAAGACCCTCCCAGCTTTGTTTTGTAACTTGAAAAATCTCGCTGATCTCGACTTGAGTTTGAATGAGTTCACAGTTTTGCCAGAGACGATCGGGGGTTTAAGCAGCCTTAGGAGGCTGAACGTCGAGACAAATGAACTTGAGGAGCTGCCATACACAATTGGAAACTGTTCAATGCTATCTATTTTGAACTTAGATTTCAATCAGCTAAAGGCCCTTCCTGAGGCAATAGGGAAGCTTGAGAGCTTGGAGATTCTCACTTTGCACTATAACAGAGTTAAAAGGTTGCCTTCTACAATAGGTAATCTAATGAACTTGAAGGAACTTGATGTTAGCTTCAATGAACTTGAATTCATACCTGAAAACCTATGTTTGGTCGTAAATTTGAGGAAACTAAATGTTGGAAAGAACTTCGCGGACCTAAGAGCCTTGCCGGAAACAATTGGAAATCTCGAGAAGCTCGAGGAGTTGGAGATAAGTGACGATCAAATAAGAGCTTTGCCCGAATCTTTCAGGCTCTTGTCTAATTTGAGAGTTTTCCGTGCTGATGAGACTCCTCTTGTGGTTCCCCCAAGAGAAGTGATTAAGTTGGGTGCTCAGGAAGTTGTGCAGTACATGGCTAATTTTGTCGCTGAGAGGGATGCAAAATTTGTGTCATCAAAAAATAAGAATAGAAGGAAGAGTATTCGATTCTGGCTTTGCTTCGGATTCTGA 1575 0.4476 MERVSDKNRPQPPRSREFLETVEEITRIYRSLPPRPSIEELEAATSALETVNSEEQSKLNEISEQQPPRGIPDDLFSVLKDLKKSVVVFQSHQQRKEALHVIDMEKMFQNFGDLIQRASELVSGGGGGGDGVGTEIDEVAGERLVVMKKIEEAEEEEEEEDEGARKNVLKKSSSAKKLFSQGTGSSEKLSIMKVATVIETCAKNGDTKLELKGKLEEQMEWLPLSIGKLSHVTEIDLSENRIMALPTTIVALKALTKLNLSSNQLINLPQSFGELINLVELNLRCNKMKTLPALFCNLKNLADLDLSLNEFTVLPETIGGLSSLRRLNVETNELEELPYTIGNCSMLSILNLDFNQLKALPEAIGKLESLEILTLHYNRVKRLPSTIGNLMNLKELDVSFNELEFIPENLCLVVNLRKLNVGKNFADLRALPETIGNLEKLEELEISDDQIRALPESFRLLSNLRVFRADETPLVVPPREVIKLGAQEVVQYMANFVAERDAKFVSSKNKNRRKSIRFWLCFGF 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01225 524 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 5 20 520 - -
Adu01g01225 524 SMART LRR_bac_2 438 457 - -
Adu01g01225 524 SMART LRR_bac_2 321 340 - -
Adu01g01225 524 SMART LRR_bac_2 413 434 - -
Adu01g01225 524 SMART LRR_bac_2 390 409 - -
Adu01g01225 524 SMART LRR_bac_2 367 386 - -
Adu01g01225 524 SMART LRR_bac_2 229 248 - -
Adu01g01225 524 SMART LRR_bac_2 344 363 - -
Adu01g01225 524 SMART LRR_bac_2 252 271 - -
Adu01g01225 524 SMART LRR_bac_2 298 317 - -
Adu01g01225 524 SMART LRR_bac_2 275 294 - -
Adu01g01225 524 Pfam Leucine rich repeat 277 334 IPR001611 GO:0005515
Adu01g01225 524 Pfam Leucine rich repeat 347 403 IPR001611 GO:0005515
Adu01g01225 524 Coils Coil 136 167 - -
Adu01g01225 524 MobiDBLite consensus disorder prediction 51 70 - -
Adu01g01225 524 ProSiteProfiles Leucine-rich repeat profile. 392 413 IPR001611 GO:0005515
Adu01g01225 524 SUPERFAMILY L domain-like 221 474 - -
Adu01g01225 524 Coils Coil 38 58 - -
Adu01g01225 524 Gene3D Ribonuclease Inhibitor 178 513 IPR032675 -
Adu01g01225 524 PANTHER LEUCINE-RICH REPEAT-CONTAINING 20 520 - -
Adu01g01225 524 SMART LRR_typ_2 367 389 IPR003591 -
Adu01g01225 524 SMART LRR_typ_2 345 366 IPR003591 -
Adu01g01225 524 SMART LRR_typ_2 275 297 IPR003591 -
Adu01g01225 524 SMART LRR_typ_2 252 274 IPR003591 -
Adu01g01225 524 SMART LRR_typ_2 321 344 IPR003591 -
Adu01g01225 524 SMART LRR_typ_2 438 460 IPR003591 -
Adu01g01225 524 SMART LRR_typ_2 298 320 IPR003591 -
Adu01g01225 524 SMART LRR_typ_2 390 413 IPR003591 -
Adu01g01225 524 SMART LRR_typ_2 229 251 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01225 Adu-Chr1 27336462 27338884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01225 222 464 Receptor kinase-like Gene Family AT5G46330 29.749 4.18e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01225 - - gmx:100798442 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01225 01 27336462 27338884 Adu01g01225 01 27336462 27338884 ECH