Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00878 ATGCAGGAGATTATAATTGTTGCTGCTGCTGCTACTCTAGGGAATCTGCTTATTGGATGGGATAGTTCAACCATTGCAGGTGGCATGGGCTACATCAAGAGGGAATTCAAACTTGATCCCACAGTTGAGGGGATGATTGTTTCCACCTCCTTCTTCACCGGCACCATCGTGACGATCTTCTCCGGAAAAGTATCCGACATGATCGGCCGGCGACCCATGCTCATAGGATCATCCATAATGTTCTTCCTAAGTGGTCTAGCCATGTTATGGGCTCCAAATGTTGCCTTCATAGTGTTTTCAAGACTCTTAGACGGCATCGGAATCGCCCTCGCCGTCACGATAACCCCGGTCTACATCTCGGAGATTGCGCCGCCGGAGATCAGAGGCTTGCTGAACACGCTACCGCAGTTCTCATGCTCTTTGGGAATGTTCTTGGCTTACATTTGGATGTTTTCAATGTCTCTTTTGGAATCTCCAAGTTGGAGAGCAATGCTTGGTGTAGTTTCCATTCCTTCTGTTGCTTATTTCTTCTTGGTTGTCTTCTTTCTTCCTGAATCTCCTCCATGGTTGGTAAGCAAAAGTAGGATTTCAGAGGCTAGGAAGGTTCTTCAGAGAATTCGTGGCCAAGAAGATGTTTCAGGAGAACTAGCATTGTTGGCAGAGGGTATGAACCCTGGAGGAGAATCAACCATCATAGAAGAATACATAATAACCCCAGCAGGAAGTACTGAACAAATATCAAACATGGAATCAGCAAAAGATTACATAAAACTTTATGGACCAAACCAGGGAGTTTCAATGATTGCTCATCCAATCAGCAGTGTACATGGTGGCGGTAGCATCCTAGCGCTGTCGCGGCAAGGAAGCGTTGCCGGGCAAGCAACCGCCGGCCTCAAGGACCCTATTGTGAATCTGTTTGGTAGCATGCATGAGAGTGATCATCATCATCATCATCATGATCTTGCTGCACAAAGCATTGATCAAGGCTCTTTTGGTACCCACCATGACAATTTGCAAGCTCCATTGCTCTCAAGGCAAGGTAGTAGTGTTGTGGACAGGAGTAGATTTTATAAGAGGAGCAGCAGCATCAAAGGAAGTAATGGTAACTTGGCTGCCCAGGGTGAAACCGCCACTAAGGCAACAAACATTGGTGGGGGTTGGCAATTGGCATATAAAGCAGTGGATGGAAAAAAGGAAGGAGGGTTCCAAAGGTTGTATTTGCATGCAGACCCTTCCATTGGTGCAGGGTCTCAGCATGGTTCATTTGTTGGGAATTCAGGGACTGATTTGCAATTAGCATTAGAGCGTGGTGAATCATTTCAAGCAGCAGCCCTTGTGAGCCAATCAGTTCTTGCTCTTAATAAGGATAACACAATAAAGCCAGAAGCTGTTGCTAATAAAGGATCAGGCTGGGGTGCTCTGCTTGAACCTGGAGTTAAACGTGCATTGATTGTTGGAATTGGGCTTCAAGCTCTTCAACAGGCTGCTGGCATAAATGGATTTCTATATTATGCTCCTCAAATCCTTGAGGAAGCAGGTGTTGGGGCACTTCTTTCAAGTTTTGGGATTACTGAAACATCAGCTTCTTTACTCGTAAATGTCATTATAACATTTTCTATGCTCCCTTGCATTGCTCTTTCCATGAAACTCATGGATATTGCAGGGAGGAGGGCACTATTGCTCAACACAATCCCCATCTTGATAGTGTCTCTAACAGTACTGGTACTAAGGGATTCATTCCCCATGAGTTCTATTGTGAATGCAGCAGTAACAGCAACATGTGTCATTGTCTATGAGAGCATCTTCTGCATGGGATTTGGTGTGATTCCTAACATTATTTGTGCAGAGATTTTCCCAACAAGTGTGAGAGGAATATGCATCTCAATTTGTGCACTCACATTTTGGATCAGCACATTGATTGTCACATCTTCATTCCCATTCTTGCTGCATCAAATTGGACTCACTGGTGTCTTTTCATTGTTTGTTTGTGGTTGCATCATTGCATGGGTGTTTGTTTACACGAAAGTTCCTGAGACAAAGGGCATGCCTTTAGAAGTCATCATCGAGTTCTTCGCCATTGGTGCTAAGCCTGGAGCAGATCCTGCCACCATGGCAAGCTAA 2121 0.4498 MQEIIIVAAAATLGNLLIGWDSSTIAGGMGYIKREFKLDPTVEGMIVSTSFFTGTIVTIFSGKVSDMIGRRPMLIGSSIMFFLSGLAMLWAPNVAFIVFSRLLDGIGIALAVTITPVYISEIAPPEIRGLLNTLPQFSCSLGMFLAYIWMFSMSLLESPSWRAMLGVVSIPSVAYFFLVVFFLPESPPWLVSKSRISEARKVLQRIRGQEDVSGELALLAEGMNPGGESTIIEEYIITPAGSTEQISNMESAKDYIKLYGPNQGVSMIAHPISSVHGGGSILALSRQGSVAGQATAGLKDPIVNLFGSMHESDHHHHHHDLAAQSIDQGSFGTHHDNLQAPLLSRQGSSVVDRSRFYKRSSSIKGSNGNLAAQGETATKATNIGGGWQLAYKAVDGKKEGGFQRLYLHADPSIGAGSQHGSFVGNSGTDLQLALERGESFQAAALVSQSVLALNKDNTIKPEAVANKGSGWGALLEPGVKRALIVGIGLQALQQAAGINGFLYYAPQILEEAGVGALLSSFGITETSASLLVNVIITFSMLPCIALSMKLMDIAGRRALLLNTIPILIVSLTVLVLRDSFPMSSIVNAAVTATCVIVYESIFCMGFGVIPNIICAEIFPTSVRGICISICALTFWISTLIVTSSFPFLLHQIGLTGVFSLFVCGCIIAWVFVYTKVPETKGMPLEVIIEFFAIGAKPGADPATMAS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00878 706 Gene3D MFS general substrate transporter like domains 433 693 IPR036259 -
Adu01g00878 706 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 703 - -
Adu01g00878 706 ProSitePatterns Sugar transport proteins signature 1. 547 563 IPR005829 GO:0016021|GO:0022857|GO:0055085
Adu01g00878 706 PANTHER - 1 703 - -
Adu01g00878 706 Gene3D MFS general substrate transporter like domains 2 253 IPR036259 -
Adu01g00878 706 SUPERFAMILY MFS general substrate transporter 9 685 IPR036259 -
Adu01g00878 706 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016021|GO:0022857|GO:0055085
Adu01g00878 706 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00878 706 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00878 706 PRINTS Sugar transporter signature 493 503 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00878 706 PRINTS Sugar transporter signature 592 613 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00878 706 PRINTS Sugar transporter signature 615 627 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00878 706 Pfam Sugar (and other) transporter 457 688 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu01g00878 706 Pfam Sugar (and other) transporter 8 223 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu01g00878 706 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 680 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00878 Adu-Chr1 11637041 11642113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00878 50 696 Organic Solute Cotransporters AT3G51490 51.085 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00878 - - gmx:100792264 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00878 01 11637041 11642113 Adu01g00878 01 11637041 11642113 ECH
Adu01g00878 01 11637041 11642113 Adu05g00312 05 3347712 3351121 ECH
Adu05g00312 05 3347712 3351121 Adu01g00878 01 11637041 11642113 PCT