Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00851 ATGTTCGCCGTGAAGAAGCTGGTTGAAAAAGCCTCCATAAAGAAGCCAGGAGGAAATTCCTCAGATGGATTAAAAGCAAGTGATGTGGATCCAAGGTTGTTATTTCATAATGGGGTGCCATCTGGTGCTGCAAACTTTGCTTTTGACAATACTCACATGATACTGGCCATTTCAACAAAGGATGGTCGGATTAAACTATATGGTAAAGGTAATTCCCAAGGCCTACTTGAATCTAGTGAGCCATTGCCTAGCAAGTTCTTACAGTTCATCCAGAACCAAGGCATTCTTATAAATGTTACTTCCAATAATCATATTGAGGTTTGGGACATAGACAAGAAACTTTTGTCAGATGCTTACATTGTGAAGGAAGAAATCACTTCCTTTGCAGTCATACAACATAGCCTATATATGTACATTGGATATTCTAATGGTAATATTTCAGTGTTGAAGATTGATCAAGAACCTTGGCATATGGTTCAAATGCAGTACACAATACCCCTCTCGGCTTCTTACGGAGATTCTGAAGTGCCTGATGATACTGTTGTGACACATATTCTGCCTCAACCAGCAGCTGAAAGTAAAAGGGTTCTGATAATCTTTAGAAATGGCCAGATAATTTTGTGGGATATTAGAGAAAGCAAAACTGTTTCCAAAACTGGTGGAAACATGTCACAACCACTCCATAGTGAAACAAAGAAAGTTTCTTCTGCATGTTGGTCATGTCCTTTTGGAAGCAAAGTTGTTGTAGGCTACAACAACGGAGAGATCTTCATTTGGAGTATCCCTTCCCTAAACATCGGACGAGACAGTTCTGTATCAGCGCCGGATCATAATACTACACAGAACACTCCTCTTCTTAAAATTAACTTGGGATACAAGTCAGAGAAAATTCCCATAGGATCAATGAAATGGATTTATGCTGAAGGGAAGGCTAGTAGATTATATGTCATGGGAGATTGTGATGATGCATCTTCTTTAAACTCATTGCAGGTAGTGTTATTGAATGATAACATAGAATCTCGCACGATTAAGTTGGGCCTTCATTTGTCTGAAAGTTGTGTTGCCATGGAGCTCATATCAGCAACTTCAAATGAACAAAGCAAGCACAGACAAGAATCTTTGATTCTGATTGGGAAATCAGGCCATATATATCAATATGATGATGGCTTGATTGAAAGATATCTGATACAAAGCCAATCCAAGTCCTCACCCTCACTTCCAAAGGAAGTGACTGTGAAATTACCATTTGCAGATTCAAGCATCACAACTTCAAAATTCATATCCAACACTACCGATGTATTAAACATTGAAGAGGAGTATTATAGAGAGCTGATAAAAAATTATCCACCACTTATTACGGTCGAAACTAATCAAAAGGACGGGTCTACACTGATGAGTTCTGCAAAGTTTACTGGATTCTCAAAAGTTCAAAATCTGTACATAACTGGACACAGCAATGGTGCTCTAAACTTCTGGGATGCTTCATGTCCCCTTTTCATCCCAATTCTGCAGTTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGCATACCCTTGACAGCATTATTTTTTGATAGCACATATCCTCTTCTTGTTTCTGGTGATCAGAGCGGAACGGTTCGCTTATTTAGATTCAAACCTGAACCATATACTACCAACAGCTTCATGTCTCTTACTGGCGGTTCAAAGAAAGGAACTGATCATATAATCCAGAGTGTAAAAGTTCTGAAGACTAATGGTGCTGTGCTTTCTATGAACATAAATCACAGTTCAACACATCTTGCAGTTGGTTCTGATCAAGGACATGTTTCAGTTTTTAGCATGGATGGACCAACATTGCTGTATCAGAAAAACATTGCTAGCGAAATATCCGCCGGCATTGTCGATCTACACTTCCTAACATGCAGTCTGCAGGGTTTTGAGAAGAACATTCTAGTGGTCGGAACAAAGGACTCATCTATTCTTGCACTTGATAGTGAAACTGGAAACACACTTGGCAATGGAAGTGTTCATCCAAAGAAGCCCTCTAGAGCTCTATTTATGCAGGTGTTGGATGGACAGGGTAACAGTGAGGATGCAACAACAAAGCAATCACATATTCTGCTTTGTTCTGAGAAGGCTTTGTATGTCTATTCATTAGTTCATGCTGTTCAGGGAACAAAAAAGGTGCTCTATAAGAAGAAGTTTCATTCTTCTTCATGTTGCTGGGCATCAACATTTCACAGCAATAATGATATTGGCCTTACGCTCCTTTTCACCAATGGAAAAGTAGAATTAAGGTCTTTGCCGGAATTATCCTTAATTGTGGAGACTTCTATTAGAGGTTTCAACTATTCGCCTCCAAAACTTGGATCATTTTCTGACATCCAGATGTGTTGTTCATCAAGAGGAGATCTTGTTTTGGTTAGTGGTGATCAAGAAATTCTTGTGTTCTCAGCATTGGTCCAAAGAAAAATTTTCAGGCTTTTGGATTCTGTCAGCACCATCTACAGCAAAGAAAGGATGGCATCACAAGAAGAGCTTGTCCCTAGCCAAGCCATTTATAAGGAAAAGAAAAAGGGAATATTCAGCTCAGTTATCAAAGATCTCACCGGTGGTAAAGAAAAGCATGCCCTGATTCCGGAAACAGAAGATTCTAAAGAGAGTATCCAGGAACTCTCAGTGATCTTTTCGAATCCGAATTTTCCTTCTGAGGCAGATAATAATGATAACCTGACTGCTGATGAAGATGATCTTGATCTAAATATAGATGACATTGACATAGATGATCATGAAGAAAAACACAGAGAACAAAACAAATTGGGATTGGGAGCTCTTAACAAGAAGAAATTGGCTGGAAAGTTTCATGCTCTAAAAGGTAAGTTGAAAGAGATGAAGGGAAACATTCACAAAACATCAGCAAAGGAAGATCAACAAGAAGAGCAAGCCGGAACAGTTGATCAAATTAAGAAAAAATATGGATTCTCTTCTTATTCTTGTTCCAATGAAACAAGTGCTGCTAAACTGTCGGAAAGCAAGCTGCGTGAGAACTTGAACAAACTGCAGGGCATTAATGTTAAAACTGCAGAAATGCAAGACACAGCAAAGTCATTTTCATCATTGGCAAATCAAGTGCTCCGAACAGCAGAACAAGATAGACGAAGTTCATAA 3153 0.3888 MFAVKKLVEKASIKKPGGNSSDGLKASDVDPRLLFHNGVPSGAANFAFDNTHMILAISTKDGRIKLYGKGNSQGLLESSEPLPSKFLQFIQNQGILINVTSNNHIEVWDIDKKLLSDAYIVKEEITSFAVIQHSLYMYIGYSNGNISVLKIDQEPWHMVQMQYTIPLSASYGDSEVPDDTVVTHILPQPAAESKRVLIIFRNGQIILWDIRESKTVSKTGGNMSQPLHSETKKVSSACWSCPFGSKVVVGYNNGEIFIWSIPSLNIGRDSSVSAPDHNTTQNTPLLKINLGYKSEKIPIGSMKWIYAEGKASRLYVMGDCDDASSLNSLQVVLLNDNIESRTIKLGLHLSESCVAMELISATSNEQSKHRQESLILIGKSGHIYQYDDGLIERYLIQSQSKSSPSLPKEVTVKLPFADSSITTSKFISNTTDVLNIEEEYYRELIKNYPPLITVETNQKDGSTLMSSAKFTGFSKVQNLYITGHSNGALNFWDASCPLFIPILQLKQQSENDFSLSGIPLTALFFDSTYPLLVSGDQSGTVRLFRFKPEPYTTNSFMSLTGGSKKGTDHIIQSVKVLKTNGAVLSMNINHSSTHLAVGSDQGHVSVFSMDGPTLLYQKNIASEISAGIVDLHFLTCSLQGFEKNILVVGTKDSSILALDSETGNTLGNGSVHPKKPSRALFMQVLDGQGNSEDATTKQSHILLCSEKALYVYSLVHAVQGTKKVLYKKKFHSSSCCWASTFHSNNDIGLTLLFTNGKVELRSLPELSLIVETSIRGFNYSPPKLGSFSDIQMCCSSRGDLVLVSGDQEILVFSALVQRKIFRLLDSVSTIYSKERMASQEELVPSQAIYKEKKKGIFSSVIKDLTGGKEKHALIPETEDSKESIQELSVIFSNPNFPSEADNNDNLTADEDDLDLNIDDIDIDDHEEKHREQNKLGLGALNKKKLAGKFHALKGKLKEMKGNIHKTSAKEDQQEEQAGTVDQIKKKYGFSSYSCSNETSAAKLSESKLRENLNKLQGINVKTAEMQDTAKSFSSLANQVLRTAEQDRRSS 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00851 1050 Gene3D - 175 524 IPR015943 GO:0005515
Adu01g00851 1050 SUPERFAMILY WD40 repeat-like 473 815 IPR036322 GO:0005515
Adu01g00851 1050 Coils Coil 956 976 - -
Adu01g00851 1050 CDD R-SNARE_STXBP5_6 982 1041 - -
Adu01g00851 1050 Gene3D - 26 170 IPR015943 GO:0005515
Adu01g00851 1050 Gene3D - 525 781 IPR015943 GO:0005515
Adu01g00851 1050 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 4 1048 - -
Adu01g00851 1050 SMART WD40_4 506 545 IPR001680 GO:0005515
Adu01g00851 1050 SMART WD40_4 28 68 IPR001680 GO:0005515
Adu01g00851 1050 SMART WD40_4 570 608 IPR001680 GO:0005515
Adu01g00851 1050 SMART WD40_4 111 150 IPR001680 GO:0005515
Adu01g00851 1050 SMART WD40_4 220 260 IPR001680 GO:0005515
Adu01g00851 1050 SUPERFAMILY WD40 repeat-like 46 610 IPR036322 GO:0005515
Adu01g00851 1050 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 4 1048 - -
Adu01g00851 1050 Pfam Lethal giant larvae(Lgl) like, C-terminal 701 831 IPR013905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00851 Adu-Chr1 11398744 11410830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00851 - - gmx:100811900 1557.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00851 01 11398744 11410830 Adu01g00851 01 11398744 11410830 ECH
Adu05g00330 05 3539720 3548224 Adu01g00851 01 11398744 11410830 PCT