Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00838 ATGGATTTTGCAACATTAAGATCTATGAATGGTGGTGGTGGTGGCTTGATTTGTGCCTTCAATTTTTCCAATGGGGTAAGCAATACTTTTCCAAGATCTTCTTGTTTTCTTCACCAACATATGAACCATAAAAGGTTCATCATGATGAAGTTGTGTAATAATGTTATTCTAAGGCACTATTATTATTCCAATAGTAGAAAAACACAAATAATATTTTCAGCTCATAGTTCCCTTAACAATAATTCCCATTATCCAAATGATGATGATGATCAAGGATCATCGATGGAGGGTGTTGTTTTTTGTGATGCAAATTCTTCTCCTTTGACTCCAATAAGTTTTTTGGAGAGAGCAGCAAGGTTTTGTGGAGAAAGAACATCACTTGTTTATGGTTCTTTGGAGTATAAATGGAGTGACACATATCAAAGGTGTTTGAAACTTGCTTCTTCTCTCACTCAGCTAGGGATCTCACCTGGTGATGTAGTTGCAACATTATCACCTAATGTTCCAGCAATGTATGAGCTGCATTTTGCAGTCCCAATGGCTGGAGCCATTATCTGCACCTTGAATTCGCGCCTCGACGCATCCATGGTTTCAGTCTTGCTGGAGCATTCACAAGCTAAGATCCTCTTTGTAGACTACCAACTGCTTGAAGTCGCGCGCAGCGCATTGGACCTGCTATGCAAAAGAACATCTTCAAAATTGCCAATTCTAGTCCTAATTGCTGATTCTGATTCTGATTCAACAATTGACACTTCTTCAATCAGTTATGAGTATGAGATGCTACTAGCAAATGGTGAAAAAGGGTTTGAAATAGTTAGGCCAAAGAGTGAAATGGATCCTATAAGTATTAATTACACCTCTGGCACCACATCAAGGCCTAAAGGAGTAATTTTTAGCCATAGAGGCGCGTATTTGAACTCGCTCGCGACAGTTCTACTCTTTCGAATGGATCTCTTCCCGGTGTATCTATGGACAGTTCCTATGTTCCATTGCAATGGATGGTGCCTTCCTTGGGGCGTGGCGGCACAATTTGGAACCAATATTTGTCTTAGGAAGGTAAAGCCAAAGGACATTTTTGATAATGTGACAAATTACAAGGTTACACACTTGGGGGGAGCTCCTACAGTTCTTAACATGATTGTGAACTCTGCTTCATTCGATAGGAAGCCGATCGATCACAAGGTATTGGCTATGACAGGTGGCTCTCCTCCGCCGCCTCAGATCATCGCCAAGATGGAAGAGCTCGGATTCACAGTTTCTCACCTCTATGGCCTCACAGAAACATATGGCCCAGGCACTTTTTGTGTCTGGAAGCCTGAATGGGACTTACTTGCGCCGCAAGAAAGATCAAGATTGAAAGCAAGGCAAGGAATTCCACATGTTGGCTTGGATGAAATTGATATCAAGGATCCGGAAACAATGGAGAGTGTTCCAAATGATGGGAAAACAATGGGGGAAGTTATGTTTAGAGGGAACACAGTGATGAGTGGATACCTTAGAGATTTGAAAGCTACAAAAGAAGTTTTCAAAGATGGTTGGTTCCATAGTGGTGATCTTGGTGTGAAACACCAAGATGGATACATAGAAATCAAGGACAGGTTGAAGGACATTATAATCTCCGGCGGGGAGAATATAAGCTCGGTCGAGGTGGAAACTGTTTTGTATAACCATCCAGCCGTGCTTGAAGCAGCAGTTGTTGCCCGGCCGGATAATCATTGGGGACAAACTCCGTGCGCATTCGTGGAGTTGAAAGAAGGGTATGATGATATGGATTCTCAAGAAATAATCAACTTCTGTAGGGATCATTTGCCACATTACATGGCACCTAAAACAGTGATTTTTCAAGATATACCAAAAACTTCAACAGGGAAGATACAAAAGTATGTTCTTAGAGAGAAAGCCAAGGCATTAGGAAGCATTTCTTAA 1926 0.4148 MDFATLRSMNGGGGGLICAFNFSNGVSNTFPRSSCFLHQHMNHKRFIMMKLCNNVILRHYYYSNSRKTQIIFSAHSSLNNNSHYPNDDDDQGSSMEGVVFCDANSSPLTPISFLERAARFCGERTSLVYGSLEYKWSDTYQRCLKLASSLTQLGISPGDVVATLSPNVPAMYELHFAVPMAGAIICTLNSRLDASMVSVLLEHSQAKILFVDYQLLEVARSALDLLCKRTSSKLPILVLIADSDSDSTIDTSSISYEYEMLLANGEKGFEIVRPKSEMDPISINYTSGTTSRPKGVIFSHRGAYLNSLATVLLFRMDLFPVYLWTVPMFHCNGWCLPWGVAAQFGTNICLRKVKPKDIFDNVTNYKVTHLGGAPTVLNMIVNSASFDRKPIDHKVLAMTGGSPPPPQIIAKMEELGFTVSHLYGLTETYGPGTFCVWKPEWDLLAPQERSRLKARQGIPHVGLDEIDIKDPETMESVPNDGKTMGEVMFRGNTVMSGYLRDLKATKEVFKDGWFHSGDLGVKHQDGYIEIKDRLKDIIISGGENISSVEVETVLYNHPAVLEAAVVARPDNHWGQTPCAFVELKEGYDDMDSQEIINFCRDHLPHYMAPKTVIFQDIPKTSTGKIQKYVLREKAKALGSIS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00838 641 ProSitePatterns Putative AMP-binding domain signature. 283 294 IPR020845 -
Adu01g00838 641 SUPERFAMILY Acetyl-CoA synthetase-like 104 635 - -
Adu01g00838 641 Pfam AMP-binding enzyme C-terminal domain 549 624 IPR025110 -
Adu01g00838 641 PANTHER ACYL-ACTIVATING ENZYME 81 640 - -
Adu01g00838 641 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 81 640 - -
Adu01g00838 641 Gene3D - 535 637 IPR045851 -
Adu01g00838 641 CDD ttLC_FACS_AEE21_like 106 632 - -
Adu01g00838 641 Pfam AMP-binding enzyme 115 540 IPR000873 -
Adu01g00838 641 Gene3D - 98 534 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00838 Adu-Chr1 11212801 11218077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00838 171 641 Miscellaneous Gene Families AT1G20560 62.791 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00838 - - aip:107622092 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00838 01 11212801 11218077 Adu01g00838 01 11212801 11218077 ECH
Adu05g00355 05 3753519 3774971 Adu01g00838 01 11212801 11218077 PCT