Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00833 ATGGGTTACACCAAATTGCCCTATCTTATAATAATATTAGCTTTCTTATTAGTGCTTGGTAGAACCACAAGAGCACAACAATGTGGTACACAAGCAAATGGAGCATTGTGCCAAGACAACTTATGTTGTAGCCAATATGGTTATTGTGGTAACACAAATGATTATTGTGGTAACGGTTGCCAAAGCCAATGTGGTGGTTCTAGTGGTGGTTCTAATGGTGATGTTAGTAGCATCATTACTTCCTCTACATTTGATGAAATGCTTAAGTACAGAAATGATCCACGGTGTAAGGGCAACGGATTCTACACTTATGATGCATTTCTTGCCGCCGCTGGCTCTTTCTCCGGCTTCGGCACCACCGGTGATGATGCCACCAAGAGGAGGGAGCTTGCTGCCTTTTTTGGTCAAACTTCCCATGAAACCACAGGAGGATGGGCAAGTGCACCAGATGGTCCATATGCTTGGGGGTATTGCTTTATCAATGAAAATAACCAGGACGCAGATTATTGTACACCCTCTACACAATGGCCATGTGCTCCTGGCAAAAAATACTATGGAAGAGGACCAATTCAACTCACTCACAATTACAATTACGGGCCAGCGGGTAATGCTATAGGATCAGATCTTCTAAACAATCCTGATCTAGTAGCAACTGATCCAGTTATTTCATTTAAGACAGCCATATGGTTTTGGATGACACCACAAGGAAATAAGCCATCATGTCATAATGTCATTACCGGAGGATGGACGCCGTCTTCTACCGATACAGCCGCCGGCCGAGTCCCTGGATATGGTGTCATCACCAACATAATCAATGGTGGGCTTGAATGCGGACACGGGCCAGATTCTCGGGTCGAAGATCGGATTGGGTTTTATAGTAGGGATGAAGGTCAGTATCTTTATTATTGTGCATTGAAGTTGGAGGCCCAAGCCCATCTTCCTCCGGCAGCCTGTTCTCTCCCCACCTCTGCCCACGATTCCGGCGATTCCACCGGCGCCAACCTCCTAGTCGCGACGGAAGCTGCTCCTAGAATCGCTTCGTTTCGAGACACGATTTTGACTAACAAAATGATGAATAAATTGACGATGGTAAAGTGTGTTGCAACCAATATTTTCCCGAGAAAACTAAAATTTGATGAAGTGGTGATGAAGAAGGGATCGACGAGCTTGTGA 1173 0.4527 MGYTKLPYLIIILAFLLVLGRTTRAQQCGTQANGALCQDNLCCSQYGYCGNTNDYCGNGCQSQCGGSSGGSNGDVSSIITSSTFDEMLKYRNDPRCKGNGFYTYDAFLAAAGSFSGFGTTGDDATKRRELAAFFGQTSHETTGGWASAPDGPYAWGYCFINENNQDADYCTPSTQWPCAPGKKYYGRGPIQLTHNYNYGPAGNAIGSDLLNNPDLVATDPVISFKTAIWFWMTPQGNKPSCHNVITGGWTPSSTDTAAGRVPGYGVITNIINGGLECGHGPDSRVEDRIGFYSRDEGQYLYYCALKLEAQAHLPPAACSLPTSAHDSGDSTGANLLVATEAAPRIASFRDTILTNKMMNKLTMVKCVATNIFPRKLKFDEVVMKKGSTSL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00833 390 ProSitePatterns Chitinases family 19 signature 1. 96 118 IPR000726 GO:0004568|GO:0006032|GO:0016998
Adu01g00833 390 Pfam Chitinase class I 78 294 IPR000726 GO:0004568|GO:0006032|GO:0016998
Adu01g00833 390 CDD chitinase_GH19 79 294 - -
Adu01g00833 390 SUPERFAMILY Plant lectins/antimicrobial peptides 27 67 IPR036861 GO:0008061
Adu01g00833 390 Gene3D - 78 294 - -
Adu01g00833 390 ProSitePatterns Chitinases family 19 signature 2. 222 232 IPR000726 GO:0004568|GO:0006032|GO:0016998
Adu01g00833 390 PANTHER CHITINASE-RELATED 9 294 - -
Adu01g00833 390 Pfam Chitin recognition protein 27 64 IPR001002 GO:0008061
Adu01g00833 390 SMART ChitinBD_3 27 64 IPR001002 GO:0008061
Adu01g00833 390 PRINTS Chitin-binding domain signature 43 50 IPR001002 GO:0008061
Adu01g00833 390 PRINTS Chitin-binding domain signature 35 43 IPR001002 GO:0008061
Adu01g00833 390 PRINTS Chitin-binding domain signature 50 57 IPR001002 GO:0008061
Adu01g00833 390 ProSiteProfiles Chitin-binding type-1 domain profile. 25 66 IPR001002 GO:0008061
Adu01g00833 390 CDD ChtBD1 27 58 - -
Adu01g00833 390 PANTHER CHITINASE (CLASS IB) / HEVEIN 9 294 - -
Adu01g00833 390 ProSitePatterns Chitin recognition or binding domain signature. 37 56 IPR018371 GO:0008061
Adu01g00833 390 SUPERFAMILY Lysozyme-like 74 294 IPR023346 -
Adu01g00833 390 Gene3D - 25 67 IPR036861 GO:0008061
Adu01g00833 390 Gene3D Endochitinase, domain 2 161 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00833 Adu-Chr1 11147587 11152136 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00833 25 294 Glycoside Hydrolase AT3G12500 68.498 3.10e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00833 K20547 - csv:101215333 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00833 01 11147587 11152136 Adu01g00833 01 11147587 11152136 ECH