Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00830 ATGTGTTCTTATTCTTTCATAGCAACTTCAGATCAAGTTCACTACCATGTTAGATCCATTAGCTTGCCTTCTAGATTACACCCTTTATCCAATGACATCGAAATCGAGCTCAAGAATTTCGAATTATTAGCATCTTCCATGAATAATGCAGATTTATTAACAAGGCTTGTGCATTTGTACAATTGTGTGAATGAACAAATCATTGTTTCTTCACTCTCCCAAAAGGTTCTTCTCCATGATCAAGATCAAGAAAAGTACTTAGATAAAGTACTTGATATGTCACTTGTTTTTCTTGATGTTTGTGGATCGGCAAGAGAATTGTTGCAACTCGCGAAAGAACACGCGCAAGAGCTTCAATCCGCGATGCGTCGCGGAAAGGGTCAAGATTGTTCCAGCATTAAGAGTCAGATTTGTGATTACTTTTGTTTCAAGAAAAGGGCAAAGAGAGAAATCTCTAAGATCCTTAAATCATTGAAGAAAATGGAAAATAATCATGGCTTTGTTAATAGTACAGCAGGGAACAATGCAGATTGCTTTTATTCTAAGTTCCTAACTCCGAATATTGTGCTTAGTTTGCCATCAAGATCTCATCCAAGCACTATTAGAGTTGATGAAGAACTCAACAAGATCAAGACATGGGAAGCAACATCAACATCAACATCTAAGTCAATTGCCATTGGTTTTTCCTTGCTTCAAGATTTGTACCTCTCATTGGATGCATTTCTCAACATGGCATCAACACAACATGTGATTTCTCAAAACCAAGGTGGTGATGAGAAATATTTTGAAGAGGTCTTGGATGGTTCAATGAGGGTTTTGGACATTTGTGGCATCACAAGGGACATTATGCTACAAATTAAGGAGAATGTTCAATCCCTTCATTCTTCTCTAAGAAGACGAAAAGGAGACTCAAGTGTTGAGAAAAGTGTGCTTGAGTACAATTTATTCACCAAGAAGATGAAGAAGAATGCCAAGAAGGTAATCACAAATTTGAAGCATATGGATAGCAAATTTGGGGTGTCACCAATTTTGAATCTTGGTGACCACTTTGGTGCTGTGGTTAGGGTTCTTAGGGAAGTGATACTAATGAACTTGTTTGTGTTCCAATTACTATTGTCTTTCTTCAACATGTCAAAGTCAAAGTCAAAGTCAAAGTCAACCAAATGGTTGATGGTGGCAAAACTTGTGCACAAAGGGGTCATAGCTTGTGAAGATAACTCAGAAAATGTCAATGAGTTGCAATGTGTGGAAGCATCTCTAAGTACCCTTTTAATTGAAGGGATTAATAATGGTGAGAAGATGCATATAGCACATGAAAAGTTGGAGGCTTTGGAGAATGTTCTAGAAAGCCTTGATAATAATTTGGATAGCACATTTAGGAACTTGATTAAGACTAGAGCCTCCCTTTTGAATATGATCTCTCAATAG 1428 0.3718 MCSYSFIATSDQVHYHVRSISLPSRLHPLSNDIEIELKNFELLASSMNNADLLTRLVHLYNCVNEQIIVSSLSQKVLLHDQDQEKYLDKVLDMSLVFLDVCGSARELLQLAKEHAQELQSAMRRGKGQDCSSIKSQICDYFCFKKRAKREISKILKSLKKMENNHGFVNSTAGNNADCFYSKFLTPNIVLSLPSRSHPSTIRVDEELNKIKTWEATSTSTSKSIAIGFSLLQDLYLSLDAFLNMASTQHVISQNQGGDEKYFEEVLDGSMRVLDICGITRDIMLQIKENVQSLHSSLRRRKGDSSVEKSVLEYNLFTKKMKKNAKKVITNLKHMDSKFGVSPILNLGDHFGAVVRVLREVILMNLFVFQLLLSFFNMSKSKSKSKSTKWLMVAKLVHKGVIACEDNSENVNELQCVEASLSTLLIEGINNGEKMHIAHEKLEALENVLESLDNNLDSTFRNLIKTRASLLNMISQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00830 475 Coils Coil 144 164 - -
Adu01g00830 475 Pfam Protein BPS1 227 472 IPR004320 GO:0048364|GO:0048367
Adu01g00830 475 Pfam Protein BPS1 53 170 IPR004320 GO:0048364|GO:0048367
Adu01g00830 475 Coils Coil 434 461 - -
Adu01g00830 475 Coils Coil 104 124 - -
Adu01g00830 475 PANTHER BPS1-LIKE PROTEIN 14 166 - -
Adu01g00830 475 PANTHER BPS1-LIKE PROTEIN 190 475 - -
Adu01g00830 475 PANTHER - 14 166 - -
Adu01g00830 475 PANTHER - 190 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00830 Adu-Chr1 11094374 11100230 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00830 - - ahf:112728133 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00830 01 11094374 11100230 Adu01g00830 01 11094374 11100230 ECH
Adu05g00360 05 3818591 3819517 Adu01g00830 01 11094374 11100230 PCT
Adu01g00830 01 11094374 11100230 Adu05g00361 05 3824570 3825535 PCT