Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00788 ATGTTGCAAGATATGTGGAATGCTCCCCCAGGATTCAGACCAACAAAGTCTGCACCTTCATCGCCGGCGAAGCCTCTCGGGGTTCCAAGAACACGCTCCGAATCCTTCCACGTCACTCACAAGGTTCCCGTTGGTGACAGTCCCTATGTTAGAGCAAAAAATGTTCAGTTGGTGGATAAGGATCCAGAGAGAGCAATTCCACTGTTTTGGGCAGCCATTAATGCCGGAGATAGAGTAGATAGTGCTTTGAAAGACATGGCAATTGTGATGAAGCAGCAGAACCGGGCCGAAGAAGCCATCGAAGCCATTAAATCTCTTCGAAGTAGATGCTCTGATCAAGCACAAGAATCCCTTGATAACATCCTCTTGGATCTTTACAAGAGATGTGGTAGACTTGATGATCAAATTGGTCTATTGAAGCACAAGCTGTTCTTGATTCAACAAGGTTTGGCTTTCAATGGCAAGCGTACAAAGACTGCGAGATCTCAAGGGAAAAAGTTTCAAGTATCTGTGGAACAAGAAGCCACAAGGTTACTGGGGAACTTGGGATGGGCATTGATGCAGCAGAACAACTATGTAGAAGCAGAAGAGGCCTATCGGCGCGCGCTATCAATAGCTCCAGACAACAACAAGATGTGCAATCTAGGCATCTGTCTGATGAAGCAAGGGAGGATAAGCGAGGCAAAAGAGACCCTCTTTAGAGTGAAACCGGCTGTCCCGGACGGCCCAAGAGGCTCAGATTCCCATCTCAAGGCCTATGAAAGGGCACAGCAAATGCTCAAAGACCTCGAATCCGAGATGATGAGCAAAGGAAATGGTGATAGGATTGAACAGAAGAGACTCTTTGAGGCTTTCTTGGGTTCGTCATCAATTTGGCAGCCTCAGCCTTGTAAGGATCATCATACAAGCATGATGCCATCATCAATGATGAACAATAAGGCAGCAGCACAGGATGAATTTGCCGATGAAAACATCAATTCCAACATAACAACAATAAATCCAGCACCACCACCAATGCAGAAAAGTACCAAACTTGTTAGTGCCATGTTGGGGAATAATTCACTCAATGTTGCAGCCCCACCATTTTATGTATCAAAATCTTCTTTGTCTTTCAAGGAGCCTATGCCACAGCCACCTATTGAGAATCCTTTCTCGGAGACCCTTAAGAGAACAAGGTCTGGAAATGCTGCAGGATCCATGAGGGTGTTGAATGATGTGGGAGAGCTCAATAACAACAAGTTGCATAGGGAAATTGAGGTGCCAGAGAACAAAACAAGAAGGAGGCTATCATTAGAGGACAATAATGATGAGAAGAACAAGTTAACAGACTTGTTACCCAACAACAAGGACTTTGAAGATGCTATTCTTTCTGCAATTCTTGGACCCCCAAATGAGTCTCATACAACAACATCAAATGACACAAATAGCACCGGGATTTTCCAGAACAAGATTGACAAGAGGCTTAAGGTTTTTCAAGATATTACATTATCTTTGAGTCCTAGGGCCTGA 1509 0.4453 MLQDMWNAPPGFRPTKSAPSSPAKPLGVPRTRSESFHVTHKVPVGDSPYVRAKNVQLVDKDPERAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIGLLKHKLFLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYVEAEEAYRRALSIAPDNNKMCNLGICLMKQGRISEAKETLFRVKPAVPDGPRGSDSHLKAYERAQQMLKDLESEMMSKGNGDRIEQKRLFEAFLGSSSIWQPQPCKDHHTSMMPSSMMNNKAAAQDEFADENINSNITTINPAPPPMQKSTKLVSAMLGNNSLNVAAPPFYVSKSSLSFKEPMPQPPIENPFSETLKRTRSGNAAGSMRVLNDVGELNNNKLHREIEVPENKTRRRLSLEDNNDEKNKLTDLLPNNKDFEDAILSAILGPPNESHTTTSNDTNSTGIFQNKIDKRLKVFQDITLSLSPRA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00788 502 Coils Coil 246 266 - -
Adu01g00788 502 MobiDBLite consensus disorder prediction 425 445 - -
Adu01g00788 502 ProSiteProfiles TPR repeat region circular profile. 176 209 - -
Adu01g00788 502 Gene3D Tetratricopeptide repeat domain 55 241 IPR011990 GO:0005515
Adu01g00788 502 PANTHER PROTEIN POLLENLESS 3-LIKE 2 5 499 - -
Adu01g00788 502 SUPERFAMILY TPR-like 57 260 IPR011990 GO:0005515
Adu01g00788 502 Pfam Tetratricopeptide repeat 186 245 - -
Adu01g00788 502 Coils Coil 89 116 - -
Adu01g00788 502 PANTHER PROTEIN POLLENLESS 3-LIKE 2 5 499 IPR044961 -
Adu01g00788 502 SMART tpr_5 176 209 IPR019734 GO:0005515
Adu01g00788 502 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Adu01g00788 502 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00788 Adu-Chr1 10637077 10639596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00788 - - adu:107476429 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00788 01 10637077 10639596 Adu01g00788 01 10637077 10639596 ECH