Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00781 ATGGTGCTCGAGGCGACGATGATCTGTATCGACAATTCGGAATGGATGCGAAACGGGGATTACTCTCCTTCTCGCTTCCAAGCTCAAGCTGACGCTGTCAATCTTATTTGCGGTGCCAAAACCCAGTCTAATCCAGAAAATACAGTGGGAGTTCTCACCATGGCCGGGAAGGGGGTTCGTGTTTTGGTCACTCCTACCAGTGATCTGGGCAAGATATTAGCTTGCATGCATGGATTAGAGATAGGTGGTGATATGAACCTAGCCGCTGGCATTCAGGTGGCACAATTGGCTCTTAAGCATCGGCAAAATAAGAAGCAGCAGCAAAGGATTATTGTCTTTGCTGGAAGTCCTGTCAAGCACGAGAAGAAAGTATTGGAGATGATTGGAAGAAAGTTAAAAAAGAATAGTGTTGCACTTGACATTGTCAATTTCGGTGAGGAAGATGAGGGGAAGACAGAGAAGCTGGAAGCACTCCTTGCAGCTGTGAACAATAATGATACCAGCCACATTGTTCATGTTCCAGCTGGTACAAATGCTCTTTCTGATGTGCTTATAAGCACACCTATTTTTACTGGCGATGGTGAAGGTGGAAGTGGATTTGCAGCTGCAGCAGCAGCAGCTGCAGCTGGTGGTGTATCTGGATTTGAGTTCGGTGTGGATCCAAACTTGGACCCCGAGCTGGCTCTTGCTTTAAGAGTTTCAATGGAAGAAGAGAGAGCCAGGCAGGAAGCAGCTGCAAAAAAAGCTGCAGAAGAAGCTTCTAAACAAGAGAAGGGTGGTGAGCAGCAAGCCAGCTCACAAGATGCAACAATGACTGAGCGTGCTAGTGCATCAGCTTCAGAAGCTGAGACAAAGACAAATGATATGATGGATGACGAGAATGCACTACTACAACAGGCTCTTGCAATGTCAATGGATGATCCTGCGATTAACCAGGAGGCCAAAGATACAGATATGTCTGAAGCAGCTTCAGATGATCCCGAATTGGCACTTGCTCTCCAATTATCGGTAGCAGATAGTTCAAAGGACTCATCTAGCCAGTCAGACATGAGTAAATTGTTGGCAGATCAATCCTTTGTGTCATCTATCCTTGCTTCGCTTCCTGGTGTTGACCCAAATGACCCATCTGTCAAAGATTTGCTGGCCTCCATGCAAAATCAATCTGAGTCTCAGCAGAAGAATGATGACAAAAAGCCACCAAGTGAGGAGGAAAAGAAGTAA 1221 0.4611 MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLEIGGDMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKHEKKVLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLAAVNNNDTSHIVHVPAGTNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEEASKQEKGGEQQASSQDATMTERASASASEAETKTNDMMDDENALLQQALAMSMDDPAINQEAKDTDMSEAASDDPELALALQLSVADSSKDSSSQSDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQNQSESQQKNDDKKPPSEEEKK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00781 406 SMART VWA_4 2 175 IPR002035 -
Adu01g00781 406 Pfam von Willebrand factor type A domain 6 115 IPR002035 -
Adu01g00781 406 MobiDBLite consensus disorder prediction 242 290 - -
Adu01g00781 406 MobiDBLite consensus disorder prediction 242 258 - -
Adu01g00781 406 MobiDBLite consensus disorder prediction 391 406 - -
Adu01g00781 406 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1 1 406 - -
Adu01g00781 406 SMART uim 292 311 IPR003903 -
Adu01g00781 406 SMART uim 324 343 IPR003903 -
Adu01g00781 406 SMART uim 222 241 IPR003903 -
Adu01g00781 406 SUPERFAMILY vWA-like 4 174 IPR036465 -
Adu01g00781 406 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 406 - -
Adu01g00781 406 Pfam Ubiquitin interaction motif 292 307 IPR003903 -
Adu01g00781 406 Pfam Ubiquitin interaction motif 324 339 IPR003903 -
Adu01g00781 406 Pfam Ubiquitin interaction motif 224 237 IPR003903 -
Adu01g00781 406 ProSiteProfiles VWFA domain profile. 5 189 IPR002035 -
Adu01g00781 406 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 324 343 IPR003903 -
Adu01g00781 406 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 222 241 IPR003903 -
Adu01g00781 406 Coils Coil 232 252 - -
Adu01g00781 406 MobiDBLite consensus disorder prediction 365 406 - -
Adu01g00781 406 Gene3D - 220 306 - -
Adu01g00781 406 Gene3D von Willebrand factor, type A domain 3 186 IPR036465 -
Adu01g00781 406 CDD VWA_26S_proteasome_subunit 1 188 - -
Adu01g00781 406 MobiDBLite consensus disorder prediction 259 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00781 Adu-Chr1 10578774 10583286 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00781 K03029 - gmx:100814594 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00781 01 10578774 10583286 Adu01g00781 01 10578774 10583286 ECH