Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00596 ATGGCGGATAATCAAAGAATTCACCCGGATATTGAGGCTTCACCTAGACCGTCGGCGCCGTTAGTCCCCGGAAACATTGCGAAATCCGAGAACGGCGATCCGAATAATAGGCCTCTACCACCACCACTTCCTCAAAGAACCTTGCCAGTGATGCATTCAAAGCCACCAAGGAGAAGAAGAAGCTGTTGCTGTAGATTCTTATGTTGCACGTTCACAACACTCTTGATTCTCATCATTGCCATAGCAATCACTGCTGGAATCTTGTTCCTAGCATTCAGGCCAAAGATTCCAAAGTACTCAGTTGACAAACTCAGAATCACAGAGTTCAATTTCTCTAGTGGCACTAACATTCTCTCTGTCACTTCCAATGTTAGAATCACTGCTAGAAATCCAAACAAGAAAATTGGGATCTATTATGAAGGTGGGAGCCACATAAGTGCATGGTATAGTGGTGCTCAACTTTGTGAAGGGTCTATGATCAAATTCTATCAAGGTCATAAGAATACTACTGTTCTTGATTTGCCACTCAGAGGCCAAATTCAAGATGCAAGTGGATTAGTTAGCAAGATTCAGCAGCAGATTCAAGATACCAATAATATCCCTCTAGATATTAAGGTCAAACAGCCAGTTAGGGTTAAATTTGGAAAATTGAAGCTTTTTAAGGTCAATTTCAGGGTTAGGTGCAAGCTTGTGGTGAATAGCCTTAGTGCTAACAATGATATTAAGATTTCAAGCAGCAGCTGTAAGTTCAGGTTTAGACTATGA 765 0.4144 MADNQRIHPDIEASPRPSAPLVPGNIAKSENGDPNNRPLPPPLPQRTLPVMHSKPPRRRRSCCCRFLCCTFTTLLILIIAIAITAGILFLAFRPKIPKYSVDKLRITEFNFSSGTNILSVTSNVRITARNPNKKIGIYYEGGSHISAWYSGAQLCEGSMIKFYQGHKNTTVLDLPLRGQIQDASGLVSKIQQQIQDTNNIPLDIKVKQPVRVKFGKLKLFKVNFRVRCKLVVNSLSANNDIKISSSSCKFRFRL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00596 254 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 18 252 - -
Adu01g00596 254 SUPERFAMILY LEA14-like 77 215 - -
Adu01g00596 254 MobiDBLite consensus disorder prediction 1 57 - -
Adu01g00596 254 MobiDBLite consensus disorder prediction 35 49 - -
Adu01g00596 254 Pfam Late embryogenesis abundant protein 125 228 IPR004864 -
Adu01g00596 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00596 Adu-Chr1 8193187 8194407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00596 39 242 EF-hand Containing Proteins AT5G21130 27.451 1.29e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00596 - - gmx:100789322 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00596 01 8193187 8194407 Adu01g00596 01 8193187 8194407 ECH
Adu01g00596 01 8193187 8194407 Adu07g01123 07 16285565 16286338 PCT