Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00341 ATGGCAGATGACTGTGCATCAAACGACAGCACACCACTGCTGCAAACCCAGTATGCGGAATCGGAGCCGAAAAGAACAGGGACGGTGTGGACAGCAGTGGCGCACATAGTGACAGGTGTCATAGGTTCAGGAGTGCTCTCACTCGCATGGAGCATAGCCCAGCTTGGATGGATCGGAGGCCCTCTCGCAATGCTTCTCTTCGCTTCCATCACTCTTCTTTCCTCTTTTCTTCTCAGCAACACCTATCGCTCCCCCGACCCTGAATATGGACCCAAACGGAGTTCTTCTTATCTTGACGCCGTTAATATTCATCAGGGAGTTGGAACTGGAAGGCTCTGTGGTGTTTTCGTGAATGTGAGCTTATATGGTTTTGGAATTGCCTACATTATTACTTCAGCTATCAGCATGAGAGCAATCCAAGAATCAAACTGTCACATTAAGAACGGGAATGGTGCATGTGAGTTTGGGGATTCATACTACATGCTTATATTTGGAGTTATCCAGATTCTTCTTTCACAGATACCAAACTTCCATAACATTCAGTGGCTTTCGGTTGTCGCGGCGGTTATGTCCTTCGCTTATGCCTTCATAGGAATGGGGTTCGCCATCAAGCAAACCGTAGAAAAAGGATATGCTGAGGGTACCATTGAAGGAATTCCTACTTCTACTGATGTTCAAAAGATGTGGCTGGTTGCTCAAGCTCTTGGTGACATAGCATTCTCCTATCCATTCTCAGTAATTCTTATAGAAGTACAGGATACCTTGAAGTCACCTCCTCCTGAAAACGTAACCATGAGGAGGGCCTCGCTAATAGCAGTCATTATCACGACGTTTTTCTACCTCTGTTGCGGCTGTGCTGGATATGCAGCTTTCGGCAATGACACACCGGGAAACCTTTTAACAGGGTTTGAATTTGCAAGGCCTCACTGGCTAGTAGACTTTGCCAATGCTTGTATAGTTGTTCATCTTGTTGGTGCATATCAGGTGTATAGCCAGCCACTCTTCGCCAATGTTGAGAATTGGCTTCGGTTCAAATTCCCGGACAGTGATTTTGTGAATCAAACATATAACTTGAAACTTCCTTTTCTGCCAGCTTTTCCGTTAAACTTCCTTCGGCTTACTTTCCGAACTGCTTATGTTGTGTCCACAACCATCATTGGNNNNNNNNNNNNNNNNAGATCTTGGGGGTTCTTGGTGGCATAA 1203 0.4514 MADDCASNDSTPLLQTQYAESEPKRTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWIGGPLAMLLFASITLLSSFLLSNTYRSPDPEYGPKRSSSYLDAVNIHQGVGTGRLCGVFVNVSLYGFGIAYIITSAISMRAIQESNCHIKNGNGACEFGDSYYMLIFGVIQILLSQIPNFHNIQWLSVVAAVMSFAYAFIGMGFAIKQTVEKGYAEGTIEGIPTSTDVQKMWLVAQALGDIAFSYPFSVILIEVQDTLKSPPPENVTMRRASLIAVIITTFFYLCCGCAGYAAFGNDTPGNLLTGFEFARPHWLVDFANACIVVHLVGAYQVYSQPLFANVENWLRFKFPDSDFVNQTYNLKLPFLPAFPLNFLRLTFRTAYVVSTTIIXXXXXXRSWGFLVA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00341 400 PANTHER OS05G0424000 PROTEIN-RELATED 9 387 - -
Adu01g00341 400 Pfam Transmembrane amino acid transporter protein 25 386 IPR013057 -
Adu01g00341 400 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 9 387 - -
Adu01g00341 400 Gene3D Amino acid/polyamine transporter I 22 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00341 Adu-Chr1 4442758 4447689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00341 20 386 Organic Solute Cotransporters AT1G77380 52.162 1.35e-135 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00341 K24917 - gmx:100801302 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00341 01 4442758 4447689 Adu01g00341 01 4442758 4447689 ECH
Adu01g00341 01 4442758 4447689 Adu07g00116 07 1092356 1095100 PCT