Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00333 ATGGCCCTCCTCACCAACCACGACCAACAACAACAACAACAACCGCAACCGCCACCGCAACTGCCTCAACAATCTTCTCAACCGCTTTCAGCTTCCGCCCCTATCTCCTCGATGGGGATGTTATCGGCCGCGAACGCTGCGGCAGCTGCGCTGAATCGCGTGGCGAGCAGTAAGGTGCCGAGAGGGAGGCGCCTGGCGGGGGACCATGTGGTGTATGACGTGGACGTGAGGCTTCCCGGGGAGGTGCAGCCGCAGCTTGAGGTGGCGCCGATAACGAAATATGGTTCGGATCCTAACTTGGTTCTTGGAAGGCAAATAGCTGTTAACAAGTCTTACATTTGCTATGGGTTGAAGCAAGGGAACATTAGAGTGCTTAATATTCACACAGCTGTTAGGTCCCTTCTCAAAGGCCATAATCAGAGGGTCACAGACTTGGCTTTCTTTGCTGAAGATGTTCATCTCCTGGCTAGTGTTGGAACAGATGGCCGTGTCTTTGTGTGGAAGATCTCTGAAGGTCCTGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATCGCTATCCAAATGGTGGGAGAGGAGAAAGTTGAAAATCCTCGAATCTGCTGGCACTGCCACAAACAAGAAATTTTGATAATTGGTATGGGAAGACATGTTCTAAGAATTGACACCACAAAAGTTGGAAATGGTGAGGCCTTTGTGACAGAGGACACTCTGAGGTGTCCTCTTGACAAGCTCATAGATGGTGTTCAGCTGGTGGGCACTCATGATGGAGAGGTGACTGATTTGTCAATGTGCCAATGGATGAGAAATCGTCTGGTATCTGCATCACATGATGGCACGATAAAGATCTGGGAAGATCGCAAGACACAGCCACTTGCGGTGATGAGACCACATGATGGGCATCCTGTTTTTTCTGCTACATTTTTCACTGCTCCCCACCGACCTGATCATATTGTTCTTATAACTGGTGGACCTCAAAATCGGGAAGTTAAGCTTTGGGTCTCAGCAAGTGAAGAAGGTTGGCTACTTCCAAGTGATGCTGAATCATGGAAATGCACGCAGACATTGGAGTTGAGGAGTTCAGCTCAACCATCTGTTAAGGACTCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGGTCTGCTTTTACTTGCAAATGCTCAGAGGAATGCTATATATGCTGTACACTTAGAATATGGTTCTAATCCTGAATCAACACGCATGGATTATATAGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACAAGTGATATATTACCTCATGGTGAACATATTGTTCAGGTTTATTGTGTTCAAACACAGGCCATTCAGCAGTATGCTTTGGATTTAGCCCAATGCCTGCCACCACCATTTGAAAATGTGGGACTAGAGAAGCCAGATTCCTCTGTTTCCCGAGATGCTGATGGATTCAGTACTGTGGACTCATCTGGTGTTAGAGCATCTGAAATGTCGTCAGCCAGTTCTGCTTCCAAAACAATGTCACAAGGTGGTAGCACTGAGAGTGCACTTGCTGGAAGATACCCTTTAAGCTCTGGCTATATTGAGGGACCTACTTCGGCTCCATCCAGTAGTGATGCTGATATTGTTTGTGTTCCATCTCCGCCTCTTCCTTTGAGCCCAAGGTTGTCTAGGAAACTGTCTGATTTCAGGAGTTCACAATCTAATTTGGGTGACCATGTTGGGGACCAATCCATTAATGATTATTCAGTTGACAGACAAATGCCTACTATTCATAGGAACTTGTCTGATGCACCACTGATGAATAATGATTTGAAGAATGATGAGAAAGTCAAACAGGATGATATTTCGAGCGTACTTAATCCCTCTGTTATGTTTAAGCAACCAACTCACCTGGTTACTCCTTCTGAAATCATTAAGGCCGGTTCTCCCCCTGAGACAAATATAATTGATAGAAATAGTGAAGGAGATACAAAGATCCCAGATGTGGTTGATTTGGGTAATGCTGAAGTAGAAGTGAAAGTGGTCGGTGAGGCTACACCTGATCAGAGCGATGAGTATAATCATCAGGGATCACAACAAAACCTACTTTCTGATGTTAAAGAAAAATACTTTTGCTCTCAGGCTTCAGATCTTGGTATTGAGATGACGCGAGAATGCTGTGCAATATCAGGGGGAACTTATATTACAGGGGAACCAGGGCAAGTTGATCTCAGTTTAGGGGAATCACTTTCCCAAACTTCTAATGCTGGTGAGGATGGACTGCAAGACTCGACAAAAGATGTGCACGAAAAGATTTCTAACTCATCTGCATCCATGACAGTACCACCTTCACCTGCACCTAACACAAAAGGGAAGAGACAGAAGGGCAAAAATTCTCAAGCATCTAGTCCATCTTCCCCATCTCCAAGTGCATGCAATTCAGTTGATTTGTCAAATGAAGTAGGTGGAAGTTCAAACCTCCCATCTGCTGAAAATGCATTTCATCAAATTCTAGCAATGCAAGAATCAATTAATCAGTTATTGACTATGCAAAAAGAGATGCAGAAGCAAATGACAATGATGGTTACAGTTCCAGTTACAAAAGAAGGTAGAAGGCTTGAGGCAGCCCTGGGGAGAACTATGGAAAAAGCTGTCAAGGCCAATATGGATGCTTTGTGGGCTCGAATTCAAGAGGAGAATGCAAAAAATGAAAAGTTGTTACGAGATCGTATTCAGCATGTTACAGGTTTGATTAGTAACTTTATGAATAAGGATCTACCAGCAATATTGGAGAAAATACTAAAGAAGGAAATAGCTTCAGTGGGTCCAGCTGCAGTCCGTGCAATGACCCCCACTATTGAGAAAATAATATCTTCAGCCATTGTAGATTCTTTCCAGAGAGGAGTAGGTGATAAGGCAGTAAATCAACTTGATAAATCAGTCAATGCAAAACTTGAAGCCACTGTTGCCAGGCAAATTCAAGCACAGTTTCAGACAACTGGAAAACAAGTGCTTCAGGATGCACTCAAATCCAGTTTTGAAATATCAGTGGTTCCCGCGTTTGAGAAATCATGCAAAGCAATGTTTGACCAAGTTGATTCTACATTTCAAAAGGGCATGGTTGAACATTCAACTTCAGTGCAACAACGCCTTGAATCTGGGCACACTTCACTGGCAATGACTCTAAGGGAATCCATTAACTCAGCTTCATCAGTTACTCAAACTTTGAGTAGAGAAGTGCTAGAGGGCCAGAGAAAGCTAATGGCATATGCAACTGCAGGAGCCAACTCTGGCACACTAAATCCTTTGCCCATTCAGCTGAACAATGGACCTCTGCTTCGTGAAAAGGTTGAAGTGCCTCTCGATCCCAAACAAGAGCTAGCAAGGTTGATAGCTGAACGGAAGTTTGAGGAAGCTTTCACCGGGGCTCTACAAAGAAGTGATGTGTCGATTGTATCTTGGTTATGTTCTCAGGTTGATTTACATGGACTTTTGTCAATGGTTCCTCTTCCTTTGACCCAAGGAGTAGTGCTTTCACTTCTGCAGCAACTGGCATGTGATATTAACAATGATACCTCACGAAAGATTGCATGGATGACGGATGTGGCTGCCGCCATTAATCCCTCAGACCCCATGATTGCGATGCATGTGCGACCCATATTTGAGCAAGTTTATCAGATACTGAATCATCAACGTAGCTTGCCTACAATGACTGGACCTGATCTTTCAAGCATCCGTCTTTTATTGCATGTCATCCACTCTATGCTGATGACATGTAAATGA 3765 0.4409 MALLTNHDQQQQQQPQPPPQLPQQSSQPLSASAPISSMGMLSAANAAAAALNRVASSKVPRGRRLAGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNLVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLKGHNQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAIQMVGEEKVENPRICWHCHKQEILIIGMGRHVLRIDTTKVGNGEAFVTEDTLRCPLDKLIDGVQLVGTHDGEVTDLSMCQWMRNRLVSASHDGTIKIWEDRKTQPLAVMRPHDGHPVFSATFFTAPHRPDHIVLITGGPQNREVKLWVSASEEGWLLPSDAESWKCTQTLELRSSAQPSVKDSFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGSNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPFENVGLEKPDSSVSRDADGFSTVDSSGVRASEMSSASSASKTMSQGGSTESALAGRYPLSSGYIEGPTSAPSSSDADIVCVPSPPLPLSPRLSRKLSDFRSSQSNLGDHVGDQSINDYSVDRQMPTIHRNLSDAPLMNNDLKNDEKVKQDDISSVLNPSVMFKQPTHLVTPSEIIKAGSPPETNIIDRNSEGDTKIPDVVDLGNAEVEVKVVGEATPDQSDEYNHQGSQQNLLSDVKEKYFCSQASDLGIEMTRECCAISGGTYITGEPGQVDLSLGESLSQTSNAGEDGLQDSTKDVHEKISNSSASMTVPPSPAPNTKGKRQKGKNSQASSPSSPSPSACNSVDLSNEVGGSSNLPSAENAFHQILAMQESINQLLTMQKEMQKQMTMMVTVPVTKEGRRLEAALGRTMEKAVKANMDALWARIQEENAKNEKLLRDRIQHVTGLISNFMNKDLPAILEKILKKEIASVGPAAVRAMTPTIEKIISSAIVDSFQRGVGDKAVNQLDKSVNAKLEATVARQIQAQFQTTGKQVLQDALKSSFEISVVPAFEKSCKAMFDQVDSTFQKGMVEHSTSVQQRLESGHTSLAMTLRESINSASSVTQTLSREVLEGQRKLMAYATAGANSGTLNPLPIQLNNGPLLREKVEVPLDPKQELARLIAERKFEEAFTGALQRSDVSIVSWLCSQVDLHGLLSMVPLPLTQGVVLSLLQQLACDINNDTSRKIAWMTDVAAAINPSDPMIAMHVRPIFEQVYQILNHQRSLPTMTGPDLSSIRLLLHVIHSMLMTCK 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00333 1254 Gene3D - 75 191 IPR015943 GO:0005515
Adu01g00333 1254 MobiDBLite consensus disorder prediction 765 821 - -
Adu01g00333 1254 MobiDBLite consensus disorder prediction 559 580 - -
Adu01g00333 1254 ProSiteProfiles Trp-Asp (WD) repeats profile. 135 177 IPR001680 GO:0005515
Adu01g00333 1254 SMART WD40_4 128 168 IPR001680 GO:0005515
Adu01g00333 1254 SMART WD40_4 250 287 IPR001680 GO:0005515
Adu01g00333 1254 Gene3D - 1166 1253 IPR044938 -
Adu01g00333 1254 Gene3D - 193 442 IPR015943 GO:0005515
Adu01g00333 1254 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 274 401 IPR032401 -
Adu01g00333 1254 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 87 205 IPR032401 -
Adu01g00333 1254 MobiDBLite consensus disorder prediction 1 33 - -
Adu01g00333 1254 ProSiteProfiles Trp-Asp (WD) repeats profile. 254 296 IPR001680 GO:0005515
Adu01g00333 1254 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 12 1254 IPR045152 GO:0031087
Adu01g00333 1254 MobiDBLite consensus disorder prediction 479 516 - -
Adu01g00333 1254 MobiDBLite consensus disorder prediction 745 821 - -
Adu01g00333 1254 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 135 172 - -
Adu01g00333 1254 SUPERFAMILY WD40 repeat-like 105 363 IPR036322 GO:0005515
Adu01g00333 1254 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 12 1254 - -
Adu01g00333 1254 MobiDBLite consensus disorder prediction 471 516 - -
Adu01g00333 1254 MobiDBLite consensus disorder prediction 554 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00333 Adu-Chr1 4291654 4301010 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00333 K12616 - gmx:100798228 1927.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00333 01 4291654 4301010 Adu01g00333 01 4291654 4301010 ECH