Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00303 ATGAACCCAACACCAAGGAAACTCGCACTCTCACTCTCACGTGCGCTCTCACGTGCCCTAACTACCGCCACCGCCGCAGCCTCGCAATCTGGATCGGCTTTCCCTCTCAAGACGGTTACCACCAAAAACTTCGAAGCTTCTCTTTCGGAGCTCCGGGACCATGTCCGAACCTCCGATTTTGTGGCCATCGACCTTGAGATGACCGGCGTAACCAGTGCGCCCTGGCGGGAGTCCTTCGAGTTCGACCGCTCCGACGTCCGGTACCTGAAGGTCAGGGACTCCGCCCACAAGTTTGCCGTCATTCAGTTCGGCGTCTGCCCCTTCCGTTGGGACTCTTCCAACCACTACTTCGTCGCTTATCCGTACAATTTCTATGTTTTTCCACATCAGGAGCTTGAGGATCTGGCTCCATGTTATGAATTTCTCTGCCAGACTACTTCAATGGATTTCTTGGCTAAATACCAGTTTGATTTCAATGCATGCATACGTGAAGGAATATCTTATTTATCTAGAGCGCAAGAAAGGGAAGCAGTAAGGAGATTGAATTCTAGATACGAAAGTGAGCATTCAAACATTTGTAAATTAAAAGACGTTAAAGGCATACAATTGATCAGCATGGCAGACATATTGTTCTCTGAACGAATGAAAAACAAATTCAGTAAATGGCGTGATGGGTTATTACAGGAGCAAAGTCGAGAAGAACAAATTATAGGAACTTCAAAAGACTCAAAACAGCTATTTGAAGTGATTTTCTTTAAGATGCATCCTGCTATTAGACTTAGTGGATTTACATCTCGGCAGCTAAAATTGATTCAGTTGGTCATCAGAAAACACTTTCAAGATTTGTCATATGTATGTGTGAATAGCGAAGATTCTGGTTCACAACATATGGTTGTATATACAGACTCAAGGGATGAACTAAACTTACTTCTGAAGGAGGTAAAAGATGGAAATCGCAAGGCAGAAGAGAAGAAGATTCAAAATGCTGTGGGATTTCGCCATGTTATTGATCTCCTTTCTGCAGAAAAGAAGTTGATTGTTGGTCATAATTGTTTTCTGGATATTGCTCATGTCTACAACAAATTTATAGGTCCCCTTCCAGGGACTCCTGAAGAGTTTGTCACCTCTATTAACAAGTATTTTCCGCACATTGTTGACACTAAAATACTCTTCAACAATAATCATGTGCTCCAAGAAAAGATGAAAAGGTCAAGAAAATCACTGGCCTCTGCATTTTCCTTGTTTTGTCCACAAATTGCAGTAGGTTCCAACAGCAGTGATCTTGATTCACCCTTACATGTGAAAGTGAATGTTGAAGTTAATGATTTGAGATCATCGAGCTGGAACCCTGGAGCCAAGCATGAGGCCGGATATGATGCTTTTATGACTGGTTGTATCTTTGCTCAAATATGCAGTGATTTAGGAGTTGATTATAAACACCATGAATCTTCTCCACAACAATTAGCCCTTAATGAGAAACTACAAAAGTATGTTAACCATCTATATCTTAGTTGGATACATGGGGACATTATTGATCTGAATACCGGTGATAAGGTTGCAGAATCTACACCAAGCAATAACCTCAAGAGGCAATATCCAAAGATTTTGTTTGAAAATATTGTTATTATTTGGGGTTTTCCTTCTCAGCTGAAGGCAAATGATCTAAGAGTGTGCATATCTAAAGTTTTTGGTCCAGCTTCTGTGGTTTCTGTCTACCACTTGGATGCGACTGCAGTATTTGTGCAGTTTAGTAAGACAGAACTAGTTTACGACTTCCTTTTGTTGAAGGACACCTTAGAAAGAAGTGATGGCACAATCTTGGTTTTGCACCCTCTTGCAAAGATTTTGGAAGGGGGCAATACATGCGCTGCTGATTATGATACTTACAAAGAAATCTGTGGTTCGCCCATTTCCGAAGCTTTGTTTGCCGAGCAGGCAAAGGCGGTTGGCATAAAGTGGAAGACCAAATTGGTAGAAAGCCAGGTCACATTGCAAGCCGAAGACCACGAAAGTCCAGGCGCAGAAGGTTCTGTAAATTCGGTTATGAAACTTGTAAAGACCAAACCAAACATAATTGAGCAGTTAAGAAATGCTCCATCTCATAGGAAAGTCTCATCTTTTGAGACCGAAGATTCTTGCTGTGCAGTAGAAATGAATGCTTGA 2163 0.4179 MNPTPRKLALSLSRALSRALTTATAAASQSGSAFPLKTVTTKNFEASLSELRDHVRTSDFVAIDLEMTGVTSAPWRESFEFDRSDVRYLKVRDSAHKFAVIQFGVCPFRWDSSNHYFVAYPYNFYVFPHQELEDLAPCYEFLCQTTSMDFLAKYQFDFNACIREGISYLSRAQEREAVRRLNSRYESEHSNICKLKDVKGIQLISMADILFSERMKNKFSKWRDGLLQEQSREEQIIGTSKDSKQLFEVIFFKMHPAIRLSGFTSRQLKLIQLVIRKHFQDLSYVCVNSEDSGSQHMVVYTDSRDELNLLLKEVKDGNRKAEEKKIQNAVGFRHVIDLLSAEKKLIVGHNCFLDIAHVYNKFIGPLPGTPEEFVTSINKYFPHIVDTKILFNNNHVLQEKMKRSRKSLASAFSLFCPQIAVGSNSSDLDSPLHVKVNVEVNDLRSSSWNPGAKHEAGYDAFMTGCIFAQICSDLGVDYKHHESSPQQLALNEKLQKYVNHLYLSWIHGDIIDLNTGDKVAESTPSNNLKRQYPKILFENIVIIWGFPSQLKANDLRVCISKVFGPASVVSVYHLDATAVFVQFSKTELVYDFLLLKDTLERSDGTILVLHPLAKILEGGNTCAADYDTYKEICGSPISEALFAEQAKAVGIKWKTKLVESQVTLQAEDHESPGAEGSVNSVMKLVKTKPNIIEQLRNAPSHRKVSSFETEDSCCAVEMNA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00303 720 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1 35 658 - -
Adu01g00303 720 SUPERFAMILY Ribonuclease H-like 29 477 IPR012337 -
Adu01g00303 720 Pfam CAF1 family ribonuclease 39 467 IPR006941 -
Adu01g00303 720 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 35 658 - -
Adu01g00303 720 Gene3D - 38 251 IPR036397 GO:0003676
Adu01g00303 720 Gene3D - 275 518 IPR036397 GO:0003676
Adu01g00303 720 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00303 Adu-Chr1 3798025 3804016 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00303 K01148 - gmx:100784997 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00303 01 3798025 3804016 Adu01g00303 01 3798025 3804016 ECH