Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00294 ATGCAGCCTCTCCGGCCGGCGAATCTTGCGCCCCTAGCGGCAGCGCTACTCCTCTTAGCCGCCGCCACAACCCATGCACACAACATTACCCGCATTTTGGAGAAGCACCCCGACTTCTCCACCTTCAACAAGTACCTAACACTAACTCACCTTGCGCCGGAGATCAACCGGCGAATCACCATAACCGTGTGCGCCATCGACAACAGCGCCATGAACGAGCTGCTGTCGAAGCACCCTTCCATCTACACTCTGAAGAACATCCTGTCCCTCCACGTCCTCCTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCACCAACGGCACCGCCCTCGCCGCCACCATGTTTCAGGCCACCGGAACCGCCCCCGGCTCCACGGGATTCGTCAACATCACCGACCTCCGCGGCGGAAAGGTGGGCTTCGGCGCCGAGAATAACGGCGGCGCCCTGTCCGCATTCTTCGTGAAATCGTTGGAGGAAATCCCTTACAACATATCCATAATACAGATCAGCAAGCCACTCCCCTCGGCTGCAGCAGAAGCCCCTACACCCGCACCCAGCAAGCAAAATCTCACTTCGATAATGTCCCGCCATGGCTGCAAGGTCTTTGCCGACACCCTCTCTGCCTCCCCCGACGCTATGTCCACCTTTTCTGACAATGTGGATGGCGGACTCACCGTCTTCTGCCCCATGGATGACGCCTTTAAGGCATTCCTACCCAAGTATAAGAACCTAACTGCAGCTGGGAAGGCGTCGTTGCTGGAGTACCATGCTACGCCTGTTTATGAGAGCATGGCTATGTTGAAGTCAAACAATGGTTTGATGAACACGCTTGCAACCGATGGAGCCAGCAAGTTCGACTTCACCGTGCAGAATGACGGTGATCAAGTCACGCTCAAGACCAAGATTGTTACTGCCAAGATCACTGGCACGCTCATTGACGAGGACCCGCTCGCGATCTACACCATTGATAAGGTTCTGCTTCCCAGGGAGCTTTTCAAGGCCCTGGCTCCGTCTCCTTCGCCCTCGCCCGCACCGGAGCCAGCCGCCGCCGACGCTCCTGCATCCCCGAAGAAAGGGGGAAAGAAGAAGAAGCAGAAGGCAGCCGACGCGCCGGCAGATGAGGAATCAGCGCCTGCGGATTCGCCCAGTGATGCCGCCGATGAGAGCGCTGACGACGGTAACGGCGCTGTTAGGTTTGACGGCGTCAGGTACGGTAACGTCATCTTCGTGGTTATGGCTTTGTGCTTTGGATTTTCGTTGCTGTAA 1269 0.5713 MQPLRPANLAPLAAALLLLAAATTHAHNITRILEKHPDFSTFNKYLTLTHLAPEINRRITITVCAIDNSAMNELLSKHPSIYTLKNILSLHVLLDYFGAKKLHQITNGTALAATMFQATGTAPGSTGFVNITDLRGGKVGFGAENNGGALSAFFVKSLEEIPYNISIIQISKPLPSAAAEAPTPAPSKQNLTSIMSRHGCKVFADTLSASPDAMSTFSDNVDGGLTVFCPMDDAFKAFLPKYKNLTAAGKASLLEYHATPVYESMAMLKSNNGLMNTLATDGASKFDFTVQNDGDQVTLKTKIVTAKITGTLIDEDPLAIYTIDKVLLPRELFKALAPSPSPSPAPEPAAADAPASPKKGGKKKKQKAADAPADEESAPADSPSDAADESADDGNGAVRFDGVRYGNVIFVVMALCFGFSLL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00294 422 MobiDBLite consensus disorder prediction 337 396 - -
Adu01g00294 422 Gene3D FAS1 domain 25 157 IPR036378 -
Adu01g00294 422 SUPERFAMILY FAS1 domain 32 174 IPR036378 -
Adu01g00294 422 SUPERFAMILY FAS1 domain 184 330 IPR036378 -
Adu01g00294 422 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12 407 IPR033254 -
Adu01g00294 422 Gene3D FAS1 domain 168 330 IPR036378 -
Adu01g00294 422 ProSiteProfiles FAS1/BIgH3 domain profile. 187 327 IPR000782 -
Adu01g00294 422 Pfam Fasciclin domain 200 329 IPR000782 -
Adu01g00294 422 Pfam Fasciclin domain 37 107 IPR000782 -
Adu01g00294 422 SMART fasc_3 62 177 IPR000782 -
Adu01g00294 422 SMART fasc_3 226 330 IPR000782 -
Adu01g00294 422 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 12 407 - -
Adu01g00294 422 ProSiteProfiles FAS1/BIgH3 domain profile. 26 174 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00294 Adu-Chr1 3661580 3663480 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00294 - - lang:109350304 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00294 01 3661580 3663480 Adu01g00294 01 3661580 3663480 ECH