Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00285 ATGCTTCATGAGCTTTGCCATAATGCCCATGGTCCTCATAATGCCAACTTCTACAAGCTTTGGGATGAACTTAGAAAGGAATGTGAAGAGCTGATGTCCAATGGAGTAACTGGCTCAGGAGAGGGGTTTGACCTTCCAGGAAGGCGCTTAGGTGGTCATTCCCGGCAGCCACCCCTTTCATCACTCCGTAAAACAGCACTTGCAGCTGCAGAAAAGAGATCGCGATTGGGATCACTCCTTCCCTCTGGACCTAACCGTCTTGGGGGTGATAGTGTTATAATGAAGGCACTTACTCCAGTGCAAGCGGCTGCAATGGCTGCAGAAAGGAGATTACAGGATGACATATGGTGTGGTTCTCAAACCTGTGAAGCTTCAGATCATGAAGATTTTAACTTTGAACCTGCTGAGAATATTGAGCGCAAGGGTAAAAATGTGGGTAGCTCAAGACTTCGAGACAATTCTTCTCTACCTTTGGATCTGAAATCTCAGAAAAGGAGTCGTGTCGTGGATTCAAGTTTACTGGATTGCTCGTCTAGTACCCCTAAATATGTTGATTTGACCATGGATGCACCACAGATTGGATCTATCATTGAACAGTGCACTGTGACTCAAGGAACGGGTGTTGGTGGATTAGAAAGCATTTCACATTCTGAGTCAAATTCTCGGATAGGATCTACTTCTGCAAATATTCCAAGCTCCTCCACTCCACTTTCTGGTGATAATAATACATCTCATTCTGAAGAACTTGCAATGTGGGAGTGCTCAATGTGCACTCTGTTAAATAAAACATTAGCTCCATTATGTGAGTTGTGTGGCACACAACAGCCGAAAGATTTTGCCACCAAATACAGTACTTGGTCTTGTAAATTCTGTACGCTGGAAAACAGTGTGAAGTTGGACAAATGCTCAGCTTGTGATCAGTGGAGATACTCTCTTGGTGCACCAGTGTCAGCCCGTGCACCTAACGTCGGCACTTGA 978 0.4499 MLHELCHNAHGPHNANFYKLWDELRKECEELMSNGVTGSGEGFDLPGRRLGGHSRQPPLSSLRKTALAAAEKRSRLGSLLPSGPNRLGGDSVIMKALTPVQAAAMAAERRLQDDIWCGSQTCEASDHEDFNFEPAENIERKGKNVGSSRLRDNSSLPLDLKSQKRSRVVDSSLLDCSSSTPKYVDLTMDAPQIGSIIEQCTVTQGTGVGGLESISHSESNSRIGSTSANIPSSSTPLSGDNNTSHSEELAMWECSMCTLLNKTLAPLCELCGTQQPKDFATKYSTWSCKFCTLENSVKLDKCSACDQWRYSLGAPVSARAPNVGT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00285 325 ProSiteProfiles Zinc finger RanBP2 type profile. 282 311 IPR001876 -
Adu01g00285 325 ProSitePatterns Zinc finger RanBP2-type signature. 286 305 IPR001876 -
Adu01g00285 325 ProSitePatterns Zinc finger RanBP2-type signature. 252 271 IPR001876 -
Adu01g00285 325 SUPERFAMILY Ran binding protein zinc finger-like 283 309 IPR036443 -
Adu01g00285 325 CDD M48_yhfN_like 1 27 - -
Adu01g00285 325 MobiDBLite consensus disorder prediction 35 60 - -
Adu01g00285 325 Gene3D - 245 285 - -
Adu01g00285 325 MobiDBLite consensus disorder prediction 148 162 - -
Adu01g00285 325 ProSiteProfiles Zinc finger RanBP2 type profile. 248 277 IPR001876 -
Adu01g00285 325 MobiDBLite consensus disorder prediction 211 242 - -
Adu01g00285 325 Pfam WLM domain 1 112 IPR013536 -
Adu01g00285 325 ProSiteProfiles WLM domain profile. 1 112 IPR013536 -
Adu01g00285 325 SMART zf_4 250 274 IPR001876 -
Adu01g00285 325 SMART zf_4 284 308 IPR001876 -
Adu01g00285 325 PANTHER ZINC ION BINDING PROTEIN 1 325 - -
Adu01g00285 325 SUPERFAMILY Ran binding protein zinc finger-like 248 275 IPR036443 -
Adu01g00285 325 MobiDBLite consensus disorder prediction 140 163 - -
Adu01g00285 325 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 325 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00285 K22685 - gmx:100795976 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00285 01 3574229 3577598 Adu01g00285 01 3574229 3577598 ECH