Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00175 ATGACAAAGTTTAAGAATTCTCAAGTTATAGTGCTCTTTATCCTTCTTCTTCTCCTTGTAATCACACCCTTGTTACCTTCTTCTCTAAGACCCACCTACATGTACTTCATATCCAATTTCCTCATCATAGCACTTGGTGCCGAAGCAGGCCTTCTTACTATTATTTTGAGGCCGTTAAACGAAAAAAAACACGTTAATTTTATAGCTCAAAAGCCTCTTATTAACAAAAGTATTACCGTTGAAAAGCTCGAGAAGTTTGTTTGCGTCGCAAAAGTGGAAGAAAAGGCGCGAAATTGCGCTTCAATGCCGAGCATTTTCTTCATTGGAGGTGATGATGGAGATGAGGATTATGAATATGATTATGATGATGATGATTTGAAGGCCGAAGATGAGATTGGAGGAGTTGATAATGGGCAAGAACTGTTTGCAAAAGCTGAAGCATTTATTGGGAACTTCTACAAGCAATTGAAGATGCAAAGAGAAGAGTCTTGGATTCATCACAAGGCCTATTAG 513 0.384 MTKFKNSQVIVLFILLLLLVITPLLPSSLRPTYMYFISNFLIIALGAEAGLLTIILRPLNEKKHVNFIAQKPLINKSITVEKLEKFVCVAKVEEKARNCASMPSIFFIGGDDGDEDYEYDYDDDDLKAEDEIGGVDNGQELFAKAEAFIGNFYKQLKMQREESWIHHKAY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00175 170 Pfam Cotton fibre expressed protein 139 167 IPR008480 -
Adu01g00175 170 PANTHER OS01G0532300 PROTEIN 82 165 - -
Adu01g00175 170 PANTHER OS01G0532300 PROTEIN 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00175 Adu-Chr1 2334611 2335416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00175 - - gmx:100785054 147.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00175 01 2334611 2335416 Adu01g00175 01 2334611 2335416 ECH
Adu01g00175 01 2334611 2335416 Adu07g00265 07 2430554 2431435 PCT