Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00163 ATGGGGAAAAGTGTTATTATGCTTTGGAGCTTTTCCCTCCTCCCCTCTTTCTTCATCTTCATGAACTTGTTGGGATTCTTAGAGGCTCAAAATAAGACTCCAATTGTTTATGTGTTTGGTGACTCTCTTGTTGATGTTGGCAATAACAATTACTTGGCTCTTTCTATTGAAAGAGCTGCTCTTCCTCACTATGGTATTGATTATCCTACAAAGAAACCAAATGGGAGGTTTAGTAATGGCAAGAATGCTGCAGATTTTATTGCTGAGAAATTGGGGATCCCAACTTCACCACCTTACCTCTCCCTAGTGTCCAAGTCCCGCAACAACAAGAATGTGTCATTTTTGGGTGGTGTTAGCTTTGCCTCTGGAGGTGCTGGAATATTCAGTGATAAAACAGATGAAATTTCTAGGCAAAACATACCTTTGCCAAATCAAGTGGACTACTACATCAAAGTGCAAGAGCAATTGAGCCAACAAATAGGAGAACCAGCACTTCAGTGTCATCTCTCCAAATCCATCTTTGTTGTTGTGATTGGAAGCAACGATCTCTTTGGTTACTTCAACTCAAAGGATCTTCAAAATAAAAGCACCCCTCAACAATACGTTGATTCCATGACTTCCTCCCTAAAACTTCAACTACAGAGATTATACGAGCAAGGTGCAAGGAAATTTGAAATTGCGGGAATTGGTGCAATTGGATGCTGTCCTTCAAACAGGCTTAAGAACAAAACAGAGTGCTTCTCGGAAGCCAATTATTGGGCACTTAAATATAATGAAGATCTTAAAACCTTGTTGAAGAATTGGCAATTGGAGAAAAAGGACATAAGATACTCCTACTTCGATACTTATGCCGCTATCGAAGATCTCATTCAGAGCCCAATTTCTTATGGATTTAGAGAAATAAAAACTGCTTGTTGTGGAATTGGTAAGCTGAATGCTGAACTTCCATGTCTCCCAATTTCCATTGTTTGTTCCAACAGACAAGACTATCTTTTCTGGGATCCTGTCCATCCTACCGAAGCTGCTACTCGCATCTTTGTCGATAGACTTTTTGATGGACCTTCAAGATATGCATCTCCTATTACCATGAGACAGCTTGTAGCTGCTTGA 1110 0.4009 MGKSVIMLWSFSLLPSFFIFMNLLGFLEAQNKTPIVYVFGDSLVDVGNNNYLALSIERAALPHYGIDYPTKKPNGRFSNGKNAADFIAEKLGIPTSPPYLSLVSKSRNNKNVSFLGGVSFASGGAGIFSDKTDEISRQNIPLPNQVDYYIKVQEQLSQQIGEPALQCHLSKSIFVVVIGSNDLFGYFNSKDLQNKSTPQQYVDSMTSSLKLQLQRLYEQGARKFEIAGIGAIGCCPSNRLKNKTECFSEANYWALKYNEDLKTLLKNWQLEKKDIRYSYFDTYAAIEDLIQSPISYGFREIKTACCGIGKLNAELPCLPISIVCSNRQDYLFWDPVHPTEAATRIFVDRLFDGPSRYASPITMRQLVAA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00163 369 SUPERFAMILY SGNH hydrolase 36 351 - -
Adu01g00163 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 367 - -
Adu01g00163 369 CDD SGNH_plant_lipase_like 34 354 IPR035669 -
Adu01g00163 369 Pfam GDSL-like Lipase/Acylhydrolase 36 348 IPR001087 GO:0016788
Adu01g00163 369 Gene3D SGNH hydrolase 25 354 IPR036514 -
Adu01g00163 369 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 13 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00163 Adu-Chr1 2240332 2244552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00163 33 353 Acyl Lipid Metabolism Gene Families AT4G10950 32.209 4.32e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00163 - - gmx:100790145 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00163 01 2240332 2244552 Adu01g00163 01 2240332 2244552 ECH
Adu01g00163 01 2240332 2244552 Adu07g00276 07 2512674 2514707 PCT