Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00156 ATGGGTCAGATCGGGAGGAGGAAGAAGAAGGGAAGGCCATCGAAGGCGGATCTGGCACGGCGCTCCGGAGAGTCTCAAGCGGCGGAGAAATCCGATATCCGGCGAAGTCTCCGGCGCCGGAATGTGAGGTACAACATCATTGACTACGATGACGATTACCTTGACGAGGATGAGGACGAGAGGAGGCGCGAAAAGAAGAAGCTGAAGCTCGTTGACAAGCTCAACAGTGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCTCGAGGGGAAGGTGAAGATGACGCAGAAGAAGAAGAGGACGCGCGTGCCGATTCGCGTGCTGAACACGCGCTTGAAGAAGATGAAGAAGGAGGAGACGTTGACGAAATTGAAGGAGGAGAAGAGAACGAGGACGCAGAAGACGAAGAAGAAATGGTAAAAGGCAGAAAAGTGGATTTGAAAGGGCTCCACTGTGCTTCAGGAACTCCAACGAATCCTCCATCTGGGATTCCACTGCCGGATAAGAGGACTCTGGAATTGATCCTTGACAAGCTTCAAAAGAAGGACACTTACGGTGTGTTCGCAGAACCAGTTGATCCAGAAGAGCTTCCCGATTATCACGATGTAATTGAGCATCCCATGGACTTTGCCACGGTCAGGAAGAAGTTGGCAAATGGATCCTATCCCACTTTGGAGCAATTTGAGAGTGATGTATTTTTAATCTGCTCAAATGCAATGCAATACAATGCACCAGAGACTATTTACCACAAACAGGCACGATCAATACAGGAACAAGGGCGGAAAAAGTTCGAGAAGTTAAGGATGGACTTTGAACGCTCCCAGGCTGAACTGAAACTAGAACAGAAAACAAGGTCTATTTCTTTGGTTAAGAAACAAGGAAAGAAGCCACTGGGTCGAGCCTCACAGGAACCCATTGGCTCTGATTTTTCCTCAGGGGCAACTCTTGCTACCATTAATGATGTACAGCCAACTTCTTTTCCAATGCAAGGCGGTAGCTGTGAGAGACCTGGAATAATTGATGGCATTCTCGAGGCAAATGCTTTCATGATTGATGCAACTCAAGAGAAACCTGAAGATATTTTGCCAGGGCGAGGTCTTCTCTCCAAGATGGGAAGGAGGTCATTAGCTCTTGATGAAGATCGCCGTGCATCTTATAATATGGCAAATCAACCAATTACACGATCAGATTCAATATTTATGACTTTTGAGAGTGAACCTAAGCATCTGGTTACTGTTGGACTTCATGCGGAGTATTCCTATGCTAGGAGTTTGGCTCGATTTAGTGCAAGTCTAGGACCTGTTGCTTGGAAAGTTGCTTCGCATAAGATTCAGCAGGCGCTGCCAGCTGGATGTAAATTTGGTCGTGGTTGGGTTGGAGAGTATGAACCTCTTCCAACCCCAGTATTAATGTTTGGCAATCGTATGCAAAAGGATGATAGTTTGGTTACGAGGTTGCATTGTAGTAGTGCATCTATAAAAGGTGACAAAAATTGTAGAAATGTGGAACCCACCATTGAGCATAATGGTGATCGGCAAGTTTTTCAGGGGAAGCAGTTTCCAATTTGTCCTCCCAATGGGCTTGCATCAGAGGGAAAACCCTCATTGTTTGGTTCTGGTGGAATAAGACCCAATGCTCCTGTTGACCTCAATAATCAGCAGAAGAATGTTCCATCCCGGAATTTTGGTAAGTCTGAGAATCAGTTTTTGAAACAAGTGGAGTTGAACTCTGCGCCTTCAATGAATGAAAATAATTCCAGTTCAGTTGCAAAGTTTCCAAGTAACGCTTCTCCAACTTTGTCTAAGCCCAGAGAAATGGTATCAAGGAACATGAATACCATTCCATCTGTATCATTCAAGCAGCCAGATACTAATGGAGTGGTTAGTAGAGAATTGCCAAATGGAAAAGTAATGAATTCTAATTCGAATAGACAGGTGACTTATCCATCATCTGAAAGTACATCAAACCAAGCAGGGAGAGCACCTCCTCTTGTCCATGGCAAGGAGCAGAGTGTCAGTGACCCAGTTCAGTTAATGAGAATGTTTGCCGAAAGGACTCAAAAACAGCAGGTTTCTAATCATTCCCCAGGTAATACTCCGCCAGTGACACCATCAGATCGATCTGTACAGAGAGATGACTCGGCCAATGCTTCAGCAGCAGCAGCAGCCGCGCGGGCATGGATGTCTGTAGGGGCAGGAGGGTTTAAACAAGTACCAGACAATTCGAGCTCACCCAAAAGTCAGATATCTGCATATTCATTGTACAATCCGACAAGAGAGCTGCATCAGCATATGTCCCAAATTCGGGGGAACTTTCCTCCTGGAGCAGCGCCTTTCCAGTCTGACAAGAACAATTTTCCATTCCAGGCATTTGTACCGCAAGCTGCTATTTCACCGTTTCCAAACAGACCTATGGTTATCCCTCAGTTAGCATCAGCTGATCTATCTAGATTTCAAAGGCAGTCCCATTGGCGAGGTCCAAGCCCTCCTAGCCAACCAAGACAAAAACAGGAAACACTTCCTCCTGACTTGAATATTGGCTTCCAATCTCCGGGATCACCTGCGAAGCAGTCTTCAGGGGTCATTGACTCGCAGCAACCAGACCTAGCTTTGCAGCTATGA 2625 0.4606 MGQIGRRKKKGRPSKADLARRSGESQAAEKSDIRRSLRRRNVRYNIIDYDDDYLDEDEDERRREKKKLKLVDKLNSDEEEEEEEEEEAARGEGEDDAEEEEDARADSRAEHALEEDEEGGDVDEIEGGEENEDAEDEEEMVKGRKVDLKGLHCASGTPTNPPSGIPLPDKRTLELILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYPTLEQFESDVFLICSNAMQYNAPETIYHKQARSIQEQGRKKFEKLRMDFERSQAELKLEQKTRSISLVKKQGKKPLGRASQEPIGSDFSSGATLATINDVQPTSFPMQGGSCERPGIIDGILEANAFMIDATQEKPEDILPGRGLLSKMGRRSLALDEDRRASYNMANQPITRSDSIFMTFESEPKHLVTVGLHAEYSYARSLARFSASLGPVAWKVASHKIQQALPAGCKFGRGWVGEYEPLPTPVLMFGNRMQKDDSLVTRLHCSSASIKGDKNCRNVEPTIEHNGDRQVFQGKQFPICPPNGLASEGKPSLFGSGGIRPNAPVDLNNQQKNVPSRNFGKSENQFLKQVELNSAPSMNENNSSSVAKFPSNASPTLSKPREMVSRNMNTIPSVSFKQPDTNGVVSRELPNGKVMNSNSNRQVTYPSSESTSNQAGRAPPLVHGKEQSVSDPVQLMRMFAERTQKQQVSNHSPGNTPPVTPSDRSVQRDDSANASAAAAAARAWMSVGAGGFKQVPDNSSSPKSQISAYSLYNPTRELHQHMSQIRGNFPPGAAPFQSDKNNFPFQAFVPQAAISPFPNRPMVIPQLASADLSRFQRQSHWRGPSPPSQPRQKQETLPPDLNIGFQSPGSPAKQSSGVIDSQQPDLALQL 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00156 874 PANTHER BROMODOMAIN CONTAINING PROTEIN 1 874 - -
Adu01g00156 874 CDD Bromodomain 169 265 - -
Adu01g00156 874 PRINTS Bromodomain signature 184 197 IPR001487 GO:0005515
Adu01g00156 874 PRINTS Bromodomain signature 198 214 IPR001487 GO:0005515
Adu01g00156 874 PRINTS Bromodomain signature 214 232 IPR001487 GO:0005515
Adu01g00156 874 PRINTS Bromodomain signature 232 251 IPR001487 GO:0005515
Adu01g00156 874 MobiDBLite consensus disorder prediction 116 137 - -
Adu01g00156 874 SUPERFAMILY Bromodomain 158 268 IPR036427 GO:0005515
Adu01g00156 874 Pfam Bromodomain 175 255 IPR001487 GO:0005515
Adu01g00156 874 MobiDBLite consensus disorder prediction 16 35 - -
Adu01g00156 874 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 1 874 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 616 661 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 580 603 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 547 565 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 818 874 - -
Adu01g00156 874 Coils Coil 97 117 - -
Adu01g00156 874 ProSitePatterns Bromodomain signature. 187 243 IPR018359 -
Adu01g00156 874 ProSiteProfiles Bromodomain profile. 181 251 IPR001487 GO:0005515
Adu01g00156 874 MobiDBLite consensus disorder prediction 1 35 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 48 143 - -
Adu01g00156 874 SMART bromo_6 162 270 IPR001487 GO:0005515
Adu01g00156 874 MobiDBLite consensus disorder prediction 58 75 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 1 15 - -
Adu01g00156 874 Coils Coil 67 94 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 532 565 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 616 673 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 76 103 - -
Adu01g00156 874 Gene3D - 168 288 IPR036427 GO:0005515
Adu01g00156 874 MobiDBLite consensus disorder prediction 687 716 - -
Adu01g00156 874 MobiDBLite consensus disorder prediction 687 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00156 Adu-Chr1 2170742 2176804 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00156 K22184 - gmx:100799986 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00156 01 2170742 2176804 Adu01g00156 01 2170742 2176804 ECH