Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00085 ATGGCAATGCCATTTTTTTCTTCCTCCTCCGCCGAGTCCAACCTCACCACAGCAAAGACCTTCCTCTCGGCGGCCGCCTCCTTCGCCGCCACAGTAATGATCATCCGGTCAGTAGCCAACGACCTCGTCCCCGGCGAGCTTCGCGACTACGCCTTATCCGGAATCCACCGCGTCCTCTCCCGGTTCTCCTCCACCGTCACCATGGTCATCGACGAATTCGACGGCCTCTCCAACAACGAAATCTACGAGGCAGCGGAAACCTACCTCGGCGCCAAAATCTCCCCCTCAGCGCAGCGCTTAAAGGTCGCCAAGCATGACACAGAGAACGACTTCACACTCACCATGGAACGCGGCGGCTCCGTAACCGACACCTTCAACGGCGTGAGCTTCGAGTGGATCCTAATCTGCCGCCAAGTCGAGTCTTCTAGAAGCTTCCACAGCGCTAGGGACATCAACTCCACCCTCCGCTCGGAGCTCCGTTCCATGGAACTCACGTTCCACAAGAAGCACAGGGCAATGGTGCTGAACACCTACCTTCCACATGTGTTGAAAGAAGCGAAATCGATGAAGCAAGAAGCAAAATCTCTTCGGATCTTCACGGTGGATTACCAGAACATGTACGGAAACGCGAGCGATGCGTGGGTGGGGACCAACCTGGACCATCCGGCGACGTTCGAGACGGTGTCGTTGGACGAAGGCATGAAAGAATTAGTGATGAAGGATTTGGAGAGGTTTGTGAGGAGGAAAGAGTTTTATAGAAAGGTTGGGAAGGCGTGGAAGAGAGGGTACTTGCTTTATGGTCCTCCTGGGACTGGGAAATCGAGCTTAATTGCAGCCATGGCTAATTACTTGCATTTCGATGTTTATGATTTGGAGTTGACGGAGCTGCAGTATAACTCTGAGCTCAGGAGGTTGCTCATTGGGATGGCCAATAGATCCATTCTTGTTGTGGAGGATATTGATTGCACCATTGAATTCAAGGATCGCATGGCAGAATCTACTGCTGCCACAGGAAGAAATGACAAGCAGGTGACTCTGTCTGGACTACTGAATTTCATTGACGGATTATGGTCAAGTTGCGGCGATGAGAGGATCATAATTTTCACAACAAACCACAAAGACAAGCTTGACCCAGCCTTGCTGCGACCCGGTCGCATGGACGTTCACATCCACATGTCTTATTGCACTCCATATGGGTTTAGGCAGCTAGCCTCCACGTACCTCGGAATTACAGAACACACCCTTTTTGGAGAGATTGAGGATGCAATTCACACAACCAAGGTAACTCCAGCTGAAGTGGCAGAGCAACTCCTCAAGAGCAGCGACATTGAAACCACTCTTAAAGAGCTCATAGACTTTCTTAGAAAGAAGAAAGAAGATCAGGCACTGGAGGATGAGAAGAAGGAACGAGATGCCAAAGACGAAGAACAGCAGAAGCAACGGCAACATGATGGTGGTAATGGAAAAGAAGTAACCGACAAGGAAGATGATAGTTAA 1497 0.5063 MAMPFFSSSSAESNLTTAKTFLSAAASFAATVMIIRSVANDLVPGELRDYALSGIHRVLSRFSSTVTMVIDEFDGLSNNEIYEAAETYLGAKISPSAQRLKVAKHDTENDFTLTMERGGSVTDTFNGVSFEWILICRQVESSRSFHSARDINSTLRSELRSMELTFHKKHRAMVLNTYLPHVLKEAKSMKQEAKSLRIFTVDYQNMYGNASDAWVGTNLDHPATFETVSLDEGMKELVMKDLERFVRRKEFYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLHFDVYDLELTELQYNSELRRLLIGMANRSILVVEDIDCTIEFKDRMAESTAATGRNDKQVTLSGLLNFIDGLWSSCGDERIIIFTTNHKDKLDPALLRPGRMDVHIHMSYCTPYGFRQLASTYLGITEHTLFGEIEDAIHTTKVTPAEVAEQLLKSSDIETTLKELIDFLRKKKEDQALEDEKKERDAKDEEQQKQRQHDGGNGKEVTDKEDDS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00085 498 ProSitePatterns AAA-protein family signature. 364 382 IPR003960 GO:0005524|GO:0016887
Adu01g00085 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 446 IPR027417 -
Adu01g00085 498 Gene3D - 391 459 - -
Adu01g00085 498 CDD AAA 260 394 - -
Adu01g00085 498 SMART AAA_5 259 396 IPR003593 -
Adu01g00085 498 Coils Coil 455 476 - -
Adu01g00085 498 Pfam ATPase family associated with various cellular activities (AAA) 264 393 IPR003959 GO:0005524|GO:0016887
Adu01g00085 498 PANTHER PROTEIN HYPER-SENSITIVITY-RELATED 4-LIKE 12 482 - -
Adu01g00085 498 Gene3D - 215 390 IPR027417 -
Adu01g00085 498 PANTHER BCS1 AAA-TYPE ATPASE 12 482 - -
Adu01g00085 498 Pfam Domain associated at C-terminal with AAA 43 135 IPR025753 -
Adu01g00085 498 MobiDBLite consensus disorder prediction 461 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00085 Adu-Chr1 1249002 1251901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00085 224 487 Miscellaneous Gene Families AT3G47060 30.769 4.80e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00085 - K08900 gmx:100788420 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00085 01 1249002 1251901 Adu01g00085 01 1249002 1251901 ECH