Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00079 ATGGCTTCTTCTATATCCCTTCTTTCCCCTTCTCTCCGATTACACCTCACTAACACTACTCTCCTTGCTCCGTTCCCTTACTATCACCGAAGCAAATGTGAAATGAGCAGGAGGAGTTTTGCGCTGAAAGGGATTGTGGCTTCCGGTGTTTCATCCATGGCTTCCACTTTGACTGCAGAAGCACAGCCATCTCAAGGTGTTGGAAGATTGCCGTACAAACCTGAAGGGTACAATTATTGGACTTGGAGGGGTCATAAGATACACTACGTAGTGCAAGGGGAAGGCTCTCCTATTGTCCTAATCCATGGTTTTGGGGCTTCTGCATTTCATTGGAGGTACAACATACCAGAATTGGCGAAAAGACACAAGGTTTACGCCTTAGACTTGCTTGGATTTGGCTGGAGTGACAAAGCACTTATCGAGTATGATGCTATGGTATGGAGGGATCAAGTGGTAGACTTCGTGAAGGAAATAGTTAAAGAACCATCCGTTTTAGTTGGAAATAGCCTTGGAGGATTCACTGCTTTGGTTTCAGCAGCTGCGTTACAGGAGCTTGTCAGTGGAGTTGTTCTACTAAACTCTGCCGGACAATTCGGGGACGGAAATAAGCAAAGTGAAAGTTCTAAAGAAACACCTCTAGCAAAGTTCGTCTTAAAACCCTTGAAGGAGGCTTTCCAGCGAGTAGTTCTTGGATTTCTTTTCTGGCAGGCAAAGCAACCTGCTCGAATTGTGTCAGTCTTGAAAAGTGTTTATGTAAATTCTTCAAATGTTGACGACTATCTAGTGGAATCTATTACAAGACCAGCTGCAGATCCCAATGCAGGAGAAGTTTATTATAGGTTAATGACACGCTTCATGACGAATCAGAGCAAGTATACACTAGATGCTGTCTTGAGCGAACTCTCTTGCCCCTTACTTCTGCTCTGGGGTGATCTTGATCCATGGGTTGGTCCCGCCAAAGCTAACCGAATCAAAGAGTTCTATCCGAAAACAACTCTCGTAAACTTGCAGGCTGGGCACTGCCCACATGACGAGATTCCGGAGCTCGTGAACAAGGCCTTACTAGATTGGTTGTCGACTCTCTATCCTGAAGAAGCATCCCTCCAGACAGTTTGA 1116 0.4534 MASSISLLSPSLRLHLTNTTLLAPFPYYHRSKCEMSRRSFALKGIVASGVSSMASTLTAEAQPSQGVGRLPYKPEGYNYWTWRGHKIHYVVQGEGSPIVLIHGFGASAFHWRYNIPELAKRHKVYALDLLGFGWSDKALIEYDAMVWRDQVVDFVKEIVKEPSVLVGNSLGGFTALVSAAALQELVSGVVLLNSAGQFGDGNKQSESSKETPLAKFVLKPLKEAFQRVVLGFLFWQAKQPARIVSVLKSVYVNSSNVDDYLVESITRPAADPNAGEVYYRLMTRFMTNQSKYTLDAVLSELSCPLLLLWGDLDPWVGPAKANRIKEFYPKTTLVNLQAGHCPHDEIPELVNKALLDWLSTLYPEEASLQTV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00079 371 PANTHER PHEOPHYTINASE, CHLOROPLASTIC-LIKE ISOFORM X1 31 361 - -
Adu01g00079 371 PRINTS Alpha/beta hydrolase fold signature 121 136 IPR000073 -
Adu01g00079 371 PRINTS Alpha/beta hydrolase fold signature 165 178 IPR000073 -
Adu01g00079 371 SUPERFAMILY alpha/beta-Hydrolases 71 359 IPR029058 -
Adu01g00079 371 Gene3D alpha/beta hydrolase 76 361 IPR029058 -
Adu01g00079 371 Pfam Alpha/beta hydrolase family 98 352 IPR000073 -
Adu01g00079 371 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 31 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00079 Adu-Chr1 1196522 1201782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00079 97 348 Acyl Lipid Metabolism Gene Families AT3G10840 24.013 7.78e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00079 - - gmx:100776976 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00079 01 1196522 1201782 Adu01g00079 01 1196522 1201782 ECH