Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00078 ATGAGTTTCAGGGATGAGGAAGCGGTTGGGAGGGACCTTCAGAAACCGTTCCTCCACACGGGGAGCTGGTACAAGATGGGTTCAAGGACGTCCAGCACCATGGGCTCATCTGCACAGGTCATGCGCGACGGTGCCGTTTCGGTCCTTTTCTGCGTTCTCGTCGCCGCCTTGGGTCCCATCCAATTCGGTTTCACGTGTGGGTATTCTTCGCCAACGCAGGAAGCCATAATCAAAGATCTAAAGCTCTCACTTTCCGAGTTCTCAGTGTTTGGATCTCTGTCCAACGTGGGTGCCATGGTTGGAGCTATTGCAAGTGGTCAGATAGCAGAGTATATTGGTCGCAAAGGGTCATTGATGATTGCTGCAATACCGAATATAATCGGGTGGCTCGCCATTTCTTTTGCCAAAGTGCCTGTTTATATAGCTGAGATAGCACCTCAAAACATGCGAGGCAGCCTTGGATCAGTTAACCAGCTATCTGTTACGATTGGAATAATGCTGGCATATCTGCTTGGCCTTTTTGTCAACTGGAGAGTGCTTGCAATTTTAGGAATTTTGCCTTGTACAGTATTAATTCCCGGATTATTTTTCATACCAGAATCTCCCCGATGGTTGGCCAAGATGGGGATGACAGATGAGTTTGAAACTTCTTTGCAAGTACTTCGAGGATTTGATACTGATATATCTCTTGAAGTACAAGAAATTAAGAGATCTGTGGCATCATCAGGAAAAAGAGTAACAATACGGTTTGCAGATCTCAAGAGGAAAAGATATTGGTTCCCTTTAACGATTGGAATTGGATTACTTGCACTTCAGCAATTGAGCGGTATCAATGGAGTTTTGTTTTATGCAACGATCATCTTTCAGAATGCAGGAATTCAATCCAGCAGTGCTGCTACAGTTGGACTTGGAGCTATTCAGGTCATAGCAACTGGAATCACTACATGGCTGGTGGACAAAAGTGGAAGAAGACTACTTCTAATTATATCGTCATCTCTAATGACAGTTAGTCTTCTCGTTGTTTCTGTAGCGTTCTATCTGGAGGGAGTTGTATCTGCAGATTCTCATCTGCAAAACATTTTGGCAACTGTTTCTGTTGTTGGACTTGTGGTTATGGTAATTGGGTTCTCCCTAGGGCTGGGACCAATCCCATGGCTTATAATGTCAGAGATACTTCCAGTGAATATAAAGAGCCTTGCTGGTAGTGTAGCCACCATGACAAACTGGTTGACTGCATGGGGGATCACAATGACGGCGAACTTGCTTTTGAGTTGGAGTAGCGGAGGAACATTCGCAATTTACATGGTGGTAACTGCCTTCACCGTTTTCTTTACGGCATTGTGGGTACCCGAGACCAAGGGAAGAACATTAGAAGAAATTCAGTCTTCCTTTAGATAG 1398 0.4485 MSFRDEEAVGRDLQKPFLHTGSWYKMGSRTSSTMGSSAQVMRDGAVSVLFCVLVAALGPIQFGFTCGYSSPTQEAIIKDLKLSLSEFSVFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLAISFAKVPVYIAEIAPQNMRGSLGSVNQLSVTIGIMLAYLLGLFVNWRVLAILGILPCTVLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFDTDISLEVQEIKRSVASSGKRVTIRFADLKRKRYWFPLTIGIGLLALQQLSGINGVLFYATIIFQNAGIQSSSAATVGLGAIQVIATGITTWLVDKSGRRLLLIISSSLMTVSLLVVSVAFYLEGVVSADSHLQNILATVSVVGLVVMVIGFSLGLGPIPWLIMSEILPVNIKSLAGSVATMTNWLTAWGITMTANLLLSWSSGGTFAIYMVVTAFTVFFTALWVPETKGRTLEEIQSSFR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00078 465 PANTHER - 14 136 - -
Adu01g00078 465 PANTHER - 137 462 - -
Adu01g00078 465 SUPERFAMILY MFS general substrate transporter 50 461 IPR036259 -
Adu01g00078 465 Gene3D MFS general substrate transporter like domains 42 465 IPR036259 -
Adu01g00078 465 Pfam Sugar (and other) transporter 137 464 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu01g00078 465 Pfam Sugar (and other) transporter 52 136 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu01g00078 465 PRINTS Sugar transporter signature 59 69 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00078 465 PRINTS Sugar transporter signature 272 282 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00078 465 PRINTS Sugar transporter signature 366 387 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00078 465 PRINTS Sugar transporter signature 389 401 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu01g00078 465 ProSitePatterns Sugar transport proteins signature 1. 105 122 IPR005829 GO:0016021|GO:0022857|GO:0055085
Adu01g00078 465 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 453 IPR020846 GO:0022857
Adu01g00078 465 CDD MFS_GLUT6_8_Class3_like 49 459 IPR044775 GO:0008643|GO:0051119
Adu01g00078 465 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 14 136 - -
Adu01g00078 465 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 137 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00078 Adu-Chr1 1183982 1190697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00078 1 465 Organic Solute Cotransporters AT1G75220 73.975 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00078 K03444 - gmx:100813399 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00078 01 1183982 1190697 Adu01g00078 01 1183982 1190697 ECH