Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00076 ATGGTGAACCTTGTGGCAGCACAGAAGCCCTTAATGAATGCTCTAATGAAGATGGCAGGGATAACTCCCTATACGGTTGAGATAGAGTCAGGGACAGTGATGAGTTTCTGGGTCCCTTCAGACACCGTAAAGAAACCAAACAAAAAACACGAAAAACCCCAAATCATATCCCAACCCAAGAAGCCAACTGTGGTGCTGGTGCACGGTTTCGCTGCCGAAGGGATAGTGACGTGGCAGTTCCAGATTGGAGCTCTAACAAAGAAATACTCTGTCTACGTCCCTGACCTTCTTTTCTTCGGAGGCTCCAAAACCAACAAGACGGAGAGGTCACCCACGTTCCAAGCGCAGTGTCTGGCGGCGGCACTGAGAAAGCTTGGGGTGGAGAAGTGTGTTGTGGTTGGGTTTAGTTATGGCGGGATGGTGGCTTTTAAGATGGCCGAGATGTATCCTGAGATGGTCCAAGCACTGGTTATCTCAGGATCCATCTTGGCCATGACGGATTCCATCAGTGTTACGACGCTGCAAGAGCTCGGATTCTCTTCATCGTCCGAGCTCTTGCTGCCTACATCTGTGAAGGGCCTTAAGGCCCTTCTCTCCGTTGCTGCCCACAAGAAGCTCTGGTTCCCGGATCGTTTACACAGAGATTTTCTTGAGGTGATGTTCTCGAATAGGAAGGAGCGAGGAGAGTTACTAGAGGGCTTAGTAATTAGCAACAGAGACATCACCATCCCAAACTTTCCACAGAGAATACATCTTCTATGGGGCGAAAAGGATCAAATTTTCAAATTAGAACTCGCGCAGAATATGAAAGAGCAACTGGGAGAGAAAAGCACATTAGAAGGAATAAAGAAAGCTGGTCACTTAGTTCATCTAGAGCGCCCATGTGTTTACAATAGATGCCTCAAGAAGTTCATTGATTCCATCTTGGTCTGA 933 0.477 MVNLVAAQKPLMNALMKMAGITPYTVEIESGTVMSFWVPSDTVKKPNKKHEKPQIISQPKKPTVVLVHGFAAEGIVTWQFQIGALTKKYSVYVPDLLFFGGSKTNKTERSPTFQAQCLAAALRKLGVEKCVVVGFSYGGMVAFKMAEMYPEMVQALVISGSILAMTDSISVTTLQELGFSSSSELLLPTSVKGLKALLSVAAHKKLWFPDRLHRDFLEVMFSNRKERGELLEGLVISNRDITIPNFPQRIHLLWGEKDQIFKLELAQNMKEQLGEKSTLEGIKKAGHLVHLERPCVYNRCLKKFIDSILV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00076 310 PANTHER - 2 307 - -
Adu01g00076 310 SUPERFAMILY alpha/beta-Hydrolases 60 307 IPR029058 -
Adu01g00076 310 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Adu01g00076 310 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Adu01g00076 310 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Adu01g00076 310 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Adu01g00076 310 PANTHER SI:DKEY-122A22.2 2 307 - -
Adu01g00076 310 Pfam alpha/beta hydrolase fold 62 171 IPR000073 -
Adu01g00076 310 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Adu01g00076 310 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Adu01g00076 310 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Adu01g00076 310 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Adu01g00076 310 Gene3D alpha/beta hydrolase 11 308 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00076 Adu-Chr1 1159921 1164678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00076 51 171 Acyl Lipid Metabolism Gene Families AT4G15960 29.365 7.67e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00076 - - gmx:100816070 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00076 01 1159921 1164678 Adu05g00812 05 9870747 9873317 ECH
Adu01g00076 01 1159921 1164678 Adu01g00076 01 1159921 1164678 ECH
Adu05g00812 05 9870747 9873317 Adu01g00076 01 1159921 1164678 PCT