Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00052 ATGGGAGGCTCATATTGTGTGAGGGAGAGGAAGCCATGTCTGAGATGGGTTGAGAAATACTTCAAAGACTGCCTTTGCAATGTGAAAGATGACATCTCCTTCAGTTTCGGTCTCATAAGTCTTGTGTGTTGGGGAGTCGCTGAAATCCCTCAGATTATTACCAATTTTCGCACCAAGTCAAGCCATGGAGTCTCCCTTGCCTTTCTCTTCACTTGGGTTGCCGGTGACATATTCAACTTGGTGGGTTGCCTTTTGGAACCAGCTACGCTTTATACAATCACTACGATCGTATTGGTACTGCAAAGCTTATACTATGACCACCTTTACAAATGGCGCAAACGTCGGCACAGGCTCAACAACAGAGGAGATCACGAAGAAGACAAAAAACCATTGAAACCGAAACCAAGTCATGAATCTGGAATTCCAATACCAAATGGCACACCCAAAGCAGCACCTCGACGGGAATATTACTATACGTCAGCAAGATCGCTAGCTGGGAGTGGCACTCCACCCTTCCGTACATACATGAGAGCTGTTAAAAGTGGCCCTTCAGCAATGGAATTGAACTGTGATTCTTCTTCGGACGATGAGGCATCGTCGTCTCCGGCGATTCCCTCTTCCACCCAACCTCGGCCCATCCCACGTTCCGCAGCTGGATATGGGACATTTCTCGCTGCATCTGTTAACCTGCCTCTGAAGGGTAATGCTCTGAGAGAAGGATACATAAGATTCAATGGACGAAAACTTCTGCAGGAGCAACAGGTACACAGTGCACTTGGTCAATGGTTGGGATGGCTCATGGCTGCTATATATATGGGAGGTCGCCTACCACAAATATGGTTGAACGTAAGTATCCAAACATTTTATTATTTAGGCTTAAATCCTTTCATGTTCGTGTTTGCACTAATTGCTAATGCTACTTATGTTGGAAGTATTCTTGTACGAACTACAGAATGGGATAGCATCAAACCTAATATGCCATGGTTGCTGGATGCTGTAGTTTGCGTGGCACTGGACCTTTTTATAATACTACAGTACATCTACTATAAATACTTCAGGAGGAGAGCACCAAGTTGTGATGGAGACTACTACGAAGACGCCAGAAAAAGCTGA 1113 0.4519 MGGSYCVRERKPCLRWVEKYFKDCLCNVKDDISFSFGLISLVCWGVAEIPQIITNFRTKSSHGVSLAFLFTWVAGDIFNLVGCLLEPATLYTITTIVLVLQSLYYDHLYKWRKRRHRLNNRGDHEEDKKPLKPKPSHESGIPIPNGTPKAAPRREYYYTSARSLAGSGTPPFRTYMRAVKSGPSAMELNCDSSSDDEASSSPAIPSSTQPRPIPRSAAGYGTFLAASVNLPLKGNALREGYIRFNGRKLLQEQQVHSALGQWLGWLMAAIYMGGRLPQIWLNVSIQTFYYLGLNPFMFVFALIANATYVGSILVRTTEWDSIKPNMPWLLDAVVCVALDLFIILQYIYYKYFRRRAPSCDGDYYEDARKS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00052 370 Gene3D - 260 358 - -
Adu01g00052 370 Gene3D - 34 125 - -
Adu01g00052 370 SMART ctns 273 306 IPR006603 -
Adu01g00052 370 SMART ctns 46 77 IPR006603 -
Adu01g00052 370 MobiDBLite consensus disorder prediction 120 135 - -
Adu01g00052 370 MobiDBLite consensus disorder prediction 120 152 - -
Adu01g00052 370 Pfam PQ loop repeat 259 319 IPR006603 -
Adu01g00052 370 Pfam PQ loop repeat 32 87 IPR006603 -
Adu01g00052 370 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 362 - -
Adu01g00052 370 MobiDBLite consensus disorder prediction 186 213 - -
Adu01g00052 370 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00052 Adu-Chr1 868209 878338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00052 K23678 - gmx:100789634 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00052 01 868209 878338 Adu01g00052 01 868209 878338 ECH
Adu05g00754 05 9001738 9004346 Adu01g00052 01 868209 878338 PCT