Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00050 ATGGGGAGAATATTAATGCAGTATATATCAACGAAAAAGGATTCCATTATTGCTAGTTCAATTGATTCTGATATAAATGATTTCAAGGTTACAGCGACAAAGCTCTTGTACAATGCAACTATGCTTGGAGGAGTTGGGTCTAGCACTTCTTTTCTCAAAGGACTTGCCTCCTTTGCTGCCATTTATTTACTGATACTTGATCGCACAAACTGGAGGACCAATATGCTCACTTCATTATTAGTGCCTTACATATTCTTCAGTCTACCTGGGTCAATATTCCACTTTTTTAGAGGAGAAATTGGAAAATGGATTGCTTCCATAGCAGTGGTGCTGAGACTCTTTTTTCCAAGACACTTTCCCGATTGGCTAGAACTACCTGGATCAATGATCCTTCTTTTGGTGGTGGCCCCTGACTTCTTTGCTATCAATATGAGGAACAACTGGGTTGGGTTGGCCATAGATCTTGCTGTTGGTTGTTACCTATTGCAAGAACATATTAGAGCTTCTGGTGGATTCAGGAATTCTTTCACACAAAAACATGGAATATCAAATACTCTTGGAATCCTCCTACTCTTAGTCTACCCCACATGGGCTTTAGTTATCAGTTGA 609 0.3974 MGRILMQYISTKKDSIIASSIDSDINDFKVTATKLLYNATMLGGVGSSTSFLKGLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPGSIFHFFRGEIGKWIASIAVVLRLFFPRHFPDWLELPGSMILLLVVAPDFFAINMRNNWVGLAIDLAVGCYLLQEHIRASGGFRNSFTQKHGISNTLGILLLLVYPTWALVIS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00050 202 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 6 201 IPR008892 GO:0016021
Adu01g00050 202 Pfam Cold acclimation protein WCOR413 13 191 IPR008892 GO:0016021
Adu01g00050 202 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2-LIKE 6 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00050 Adu-Chr1 819999 822406 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00050 - - gmx:100817084 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00050 01 819999 822406 Adu01g00050 01 819999 822406 ECH