Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02098 ATGATGGATCCCAAGGCTCTGCGATTCATTAGGTACCAGTCCATTTTCTCAGTAGCTCGATCTGGGGACTTGGATGAGCTGAAGCAACTCTTGGAGCAGCTTAAGAGCGAAGATGCTTCGTTGTTTTCTAATGTCATGTCCCTTCAGAACGATGCCGGAGAGACGGCGCTGTACATCGCTGCCGAGCATAATCTGGCTGAAATTTTTGGCTACTTGCTTCAGTACTGTGACTTGGAGATTGTGAAGATCAGGTCCAAATCCGACATGAATGCCTTCCATGTTGCCGCCAAGCGTGGTCATCTAGATATCGTGAAAGAGTTTTTGATCAAGATGCCCGAGGTTTGTAAGTTGTGTGACTCCTCAAACACTAGTCCCCTGTATTCAGCTGCGGTTCAAGACCATTTGGACGTGGTGAAAGCTATCATCGATGCAGATGTCGAATCAATGTGGATAGTTAGGAAAAATGGAAAAACTGCATTGCACAATGCTGCCAGGTATGGGCTTCTTTCGATTGTGAAAGCACTTATTGACCGGGATGGAGGAATAGTCACTGTCAAAGATAAAAAGGGTCAAACTGCACTGCATATGGCTGTAAAAGGACAGTGTCCCTTAGTGGTAAAGGAGATATTACAAGCTGATCCCACCATATTGAATGAACGAGATAAGAAGGGAAATACTGCTTTACACATGGCTACAAGGAAGGGTCGTTCACAGATTGTTAGTCTTCTGCTAAATTGCACAGCTACGGATATTAATGCAATAAATAACCAGAAGGAAACAGCGTTGGATTTGGCAGATAAATTGCCGTATGGGGATTCAGCTTTGGAAATCAAGGAGGCCCTTGCAGACTGTGGTGCCAAGTACGCCAGGCACGTTGGCAAAGTTGATGAAGCCATGGAACTTAAAAGAACTGTGAGTGATATAAAGCATGAAGTGCAGTCACAACTTGAGGCAAACTTAAAAACTCGCAAGCGAGTTTCTGGTATTGCTAAAGAATTGAAAAAGCTTCACAGAGAAGCAGTTCAAAATACAATTAACTCCCTCACAATGGTTGCTGTCCTTTTTGCCTCAGTAGCATTCTTGGCTATATTCAGTTTGCCTGGCCAATATTTCACGGAAGGACCTGAGATTGGGAAGGCTCATATAGCTGACAATGTTGCTTTCCAAGCTTTCTTTCTTTTAAACTCTACATCACTTTTCATCTCTCTATCTGTGGTGGTTGTTCAGATCACTTTGGTAGCCTGGGACACAAGTGCTCAAAAGCTGGTTGTGTCAGTGGTTAACAAGCTCATGTGGGCTGCTGGTTCTTGCACATGTGGGGCTTTTCTGGCTTTGGCATTTGTTGTTGTTGGGAAAAAGCAAACATGGATGGCTATTACCATAACCGTTTTGGGTGTACCCACTATAATTGGAACTCTAGCATGCCTATGCTACTATGTTTTCCAACGACATTTTGGCATTTTCGGCGGCGATTCCCAGAGACGCATAAAGAGAGCAAGTGGGAGCAAATCTTTCTCTTGGTCCTACTCTGCAAATATATCTGAATTGGATGCTTATGATTCTGACGTTGAGAAAATCTATGCTCTGTGA 1590 0.4377 MMDPKALRFIRYQSIFSVARSGDLDELKQLLEQLKSEDASLFSNVMSLQNDAGETALYIAAEHNLAEIFGYLLQYCDLEIVKIRSKSDMNAFHVAAKRGHLDIVKEFLIKMPEVCKLCDSSNTSPLYSAAVQDHLDVVKAIIDADVESMWIVRKNGKTALHNAARYGLLSIVKALIDRDGGIVTVKDKKGQTALHMAVKGQCPLVVKEILQADPTILNERDKKGNTALHMATRKGRSQIVSLLLNCTATDINAINNQKETALDLADKLPYGDSALEIKEALADCGAKYARHVGKVDEAMELKRTVSDIKHEVQSQLEANLKTRKRVSGIAKELKKLHREAVQNTINSLTMVAVLFASVAFLAIFSLPGQYFTEGPEIGKAHIADNVAFQAFFLLNSTSLFISLSVVVVQITLVAWDTSAQKLVVSVVNKLMWAAGSCTCGAFLALAFVVVGKKQTWMAITITVLGVPTIIGTLACLCYYVFQRHFGIFGGDSQRRIKRASGSKSFSWSYSANISELDAYDSDVEKIYAL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02098 529 ProSiteProfiles Ankyrin repeat profile. 155 187 IPR002110 GO:0005515
Accr9g02098 529 SMART ANK_2a 189 218 IPR002110 GO:0005515
Accr9g02098 529 SMART ANK_2a 87 116 IPR002110 GO:0005515
Accr9g02098 529 SMART ANK_2a 121 150 IPR002110 GO:0005515
Accr9g02098 529 SMART ANK_2a 52 80 IPR002110 GO:0005515
Accr9g02098 529 SMART ANK_2a 155 185 IPR002110 GO:0005515
Accr9g02098 529 SMART ANK_2a 223 253 IPR002110 GO:0005515
Accr9g02098 529 Gene3D - 146 307 IPR036770 -
Accr9g02098 529 Pfam Ankyrin repeat 224 256 IPR002110 GO:0005515
Accr9g02098 529 Pfam Ankyrin repeats (3 copies) 87 146 IPR002110 GO:0005515
Accr9g02098 529 Pfam Ankyrin repeats (3 copies) 150 216 IPR002110 GO:0005515
Accr9g02098 529 ProSiteProfiles Ankyrin repeat profile. 223 245 IPR002110 GO:0005515
Accr9g02098 529 Coils Coil 24 44 - -
Accr9g02098 529 ProSiteProfiles Ankyrin repeat region circular profile. 223 245 - -
Accr9g02098 529 Pfam Domain of unknown function 339 448 IPR026961 -
Accr9g02098 529 SUPERFAMILY Ankyrin repeat 15 270 IPR036770 -
Accr9g02098 529 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 16 508 - -
Accr9g02098 529 Gene3D - 5 143 IPR036770 -
Accr9g02098 529 ProSiteProfiles Ankyrin repeat region circular profile. 155 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02098 Accr-Chr9 45621288 45623893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02098 2 529 Miscellaneous Gene Families AT2G01680 66.168 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02098 - - gmx:100799055 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g02098 9 45621288 45623893 Accr9g02098 9 45621288 45623893 ECH